Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC30.63■■■□□ 2.49
SLC52A1Q9NWF4 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC30.62■■■□□ 2.49
SLC52A1Q9NWF4 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
SLC52A1Q9NWF4 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC30.62■■■□□ 2.49
SLC52A1Q9NWF4 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC30.62■■■□□ 2.49
SLC52A1Q9NWF4 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC30.62■■■□□ 2.49
SLC52A1Q9NWF4 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC30.62■■■□□ 2.49
SLC52A1Q9NWF4 RPS2P4-201ENST00000476944 856 ntBASIC30.62■■■□□ 2.49
SLC52A1Q9NWF4 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC30.62■■■□□ 2.49
SLC52A1Q9NWF4 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC30.62■■■□□ 2.49
SLC52A1Q9NWF4 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC30.62■■■□□ 2.49
SLC52A1Q9NWF4 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC30.61■■■□□ 2.49
SLC52A1Q9NWF4 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC30.61■■■□□ 2.49
SLC52A1Q9NWF4 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC30.61■■■□□ 2.49
SLC52A1Q9NWF4 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC30.61■■■□□ 2.49
SLC52A1Q9NWF4 SERPINH1P1-201ENST00000419794 1249 ntBASIC30.61■■■□□ 2.49
SLC52A1Q9NWF4 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC30.61■■■□□ 2.49
SLC52A1Q9NWF4 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC30.61■■■□□ 2.49
SLC52A1Q9NWF4 AP003097.1-201ENST00000530657 1135 ntBASIC30.61■■■□□ 2.49
SLC52A1Q9NWF4 AC073648.6-201ENST00000641589 218 ntBASIC30.61■■■□□ 2.49
SLC52A1Q9NWF4 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC30.61■■■□□ 2.49
SLC52A1Q9NWF4 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
SLC52A1Q9NWF4 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
SLC52A1Q9NWF4 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
SLC52A1Q9NWF4 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC30.6■■■□□ 2.49
SLC52A1Q9NWF4 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
SLC52A1Q9NWF4 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
SLC52A1Q9NWF4 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
SLC52A1Q9NWF4 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC30.6■■■□□ 2.49
SLC52A1Q9NWF4 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC30.6■■■□□ 2.49
SLC52A1Q9NWF4 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
SLC52A1Q9NWF4 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC30.59■■■□□ 2.49
SLC52A1Q9NWF4 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
SLC52A1Q9NWF4 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
SLC52A1Q9NWF4 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC30.59■■■□□ 2.49
SLC52A1Q9NWF4 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC30.59■■■□□ 2.49
SLC52A1Q9NWF4 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC30.59■■■□□ 2.49
SLC52A1Q9NWF4 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC30.59■■■□□ 2.49
SLC52A1Q9NWF4 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
SLC52A1Q9NWF4 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC30.59■■■□□ 2.49
SLC52A1Q9NWF4 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
SLC52A1Q9NWF4 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC30.58■■■□□ 2.49
SLC52A1Q9NWF4 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
SLC52A1Q9NWF4 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC30.58■■■□□ 2.49
SLC52A1Q9NWF4 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
SLC52A1Q9NWF4 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC30.58■■■□□ 2.49
SLC52A1Q9NWF4 LSM12P1-201ENST00000411836 588 ntBASIC30.58■■■□□ 2.49
SLC52A1Q9NWF4 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC30.58■■■□□ 2.49
SLC52A1Q9NWF4 CASP6-205ENST00000505486 538 ntTSL 4 BASIC30.58■■■□□ 2.49
SLC52A1Q9NWF4 AC100791.3-201ENST00000617619 330 ntBASIC30.58■■■□□ 2.49
SLC52A1Q9NWF4 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
SLC52A1Q9NWF4 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC30.58■■■□□ 2.49
SLC52A1Q9NWF4 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC30.58■■■□□ 2.49
SLC52A1Q9NWF4 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
SLC52A1Q9NWF4 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC30.57■■■□□ 2.48
SLC52A1Q9NWF4 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC30.57■■■□□ 2.48
SLC52A1Q9NWF4 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC30.57■■■□□ 2.48
SLC52A1Q9NWF4 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC30.57■■■□□ 2.48
SLC52A1Q9NWF4 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC30.57■■■□□ 2.48
SLC52A1Q9NWF4 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
SLC52A1Q9NWF4 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC30.57■■■□□ 2.48
SLC52A1Q9NWF4 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC30.57■■■□□ 2.48
SLC52A1Q9NWF4 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
SLC52A1Q9NWF4 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC30.57■■■□□ 2.48
SLC52A1Q9NWF4 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
SLC52A1Q9NWF4 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC30.56■■■□□ 2.48
SLC52A1Q9NWF4 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
SLC52A1Q9NWF4 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
SLC52A1Q9NWF4 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
SLC52A1Q9NWF4 GATS-209ENST00000454084 1030 ntTSL 3 BASIC30.56■■■□□ 2.48
SLC52A1Q9NWF4 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC30.56■■■□□ 2.48
SLC52A1Q9NWF4 FAM21FP-204ENST00000608637 956 ntBASIC30.56■■■□□ 2.48
SLC52A1Q9NWF4 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC30.56■■■□□ 2.48
SLC52A1Q9NWF4 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC30.56■■■□□ 2.48
SLC52A1Q9NWF4 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC30.56■■■□□ 2.48
SLC52A1Q9NWF4 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC30.56■■■□□ 2.48
SLC52A1Q9NWF4 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC30.55■■■□□ 2.48
SLC52A1Q9NWF4 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC30.55■■■□□ 2.48
SLC52A1Q9NWF4 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC30.55■■■□□ 2.48
SLC52A1Q9NWF4 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC30.55■■■□□ 2.48
SLC52A1Q9NWF4 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC30.55■■■□□ 2.48
SLC52A1Q9NWF4 AC139530.1-201ENST00000575312 1977 ntBASIC30.55■■■□□ 2.48
SLC52A1Q9NWF4 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC30.55■■■□□ 2.48
SLC52A1Q9NWF4 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
SLC52A1Q9NWF4 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
SLC52A1Q9NWF4 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
SLC52A1Q9NWF4 KRT17P1-201ENST00000399211 1546 ntBASIC30.54■■■□□ 2.48
SLC52A1Q9NWF4 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
SLC52A1Q9NWF4 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC30.54■■■□□ 2.48
SLC52A1Q9NWF4 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC30.54■■■□□ 2.48
SLC52A1Q9NWF4 UNC93B4-201ENST00000505679 747 ntBASIC30.54■■■□□ 2.48
SLC52A1Q9NWF4 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC30.54■■■□□ 2.48
SLC52A1Q9NWF4 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC30.54■■■□□ 2.48
SLC52A1Q9NWF4 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
SLC52A1Q9NWF4 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC30.54■■■□□ 2.48
SLC52A1Q9NWF4 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
SLC52A1Q9NWF4 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC30.53■■■□□ 2.48
SLC52A1Q9NWF4 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC30.53■■■□□ 2.48
SLC52A1Q9NWF4 AC091799.1-201ENST00000422823 811 ntBASIC30.53■■■□□ 2.48
SLC52A1Q9NWF4 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms