Protein–RNA interactions for Protein: Q9NRA0

SPHK2, Sphingosine kinase 2, humanhuman

Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK2Q9NRA0 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
SPHK2Q9NRA0 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SPHK2Q9NRA0 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
SPHK2Q9NRA0 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SPHK2Q9NRA0 AC026471.6-201ENST00000622954 1905 ntBASIC21.68■■□□□ 1.06
SPHK2Q9NRA0 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC21.68■■□□□ 1.06
SPHK2Q9NRA0 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC21.68■■□□□ 1.06
SPHK2Q9NRA0 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SPHK2Q9NRA0 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SPHK2Q9NRA0 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SPHK2Q9NRA0 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC21.67■■□□□ 1.06
SPHK2Q9NRA0 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SPHK2Q9NRA0 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SPHK2Q9NRA0 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SPHK2Q9NRA0 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC21.67■■□□□ 1.06
SPHK2Q9NRA0 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC21.67■■□□□ 1.06
SPHK2Q9NRA0 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC21.67■■□□□ 1.06
SPHK2Q9NRA0 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
SPHK2Q9NRA0 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SPHK2Q9NRA0 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
SPHK2Q9NRA0 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC21.66■■□□□ 1.06
SPHK2Q9NRA0 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC21.66■■□□□ 1.06
SPHK2Q9NRA0 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC21.66■■□□□ 1.06
SPHK2Q9NRA0 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SPHK2Q9NRA0 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
SPHK2Q9NRA0 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC21.66■■□□□ 1.06
SPHK2Q9NRA0 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SPHK2Q9NRA0 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC21.66■■□□□ 1.06
SPHK2Q9NRA0 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
SPHK2Q9NRA0 FGF8-207ENST00000618991 856 ntTSL 3 BASIC21.66■■□□□ 1.06
SPHK2Q9NRA0 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SPHK2Q9NRA0 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SPHK2Q9NRA0 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
SPHK2Q9NRA0 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SPHK2Q9NRA0 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SPHK2Q9NRA0 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SPHK2Q9NRA0 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SPHK2Q9NRA0 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SPHK2Q9NRA0 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC21.65■■□□□ 1.06
SPHK2Q9NRA0 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SPHK2Q9NRA0 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SPHK2Q9NRA0 RBM17P2-201ENST00000616397 1405 ntBASIC21.65■■□□□ 1.06
SPHK2Q9NRA0 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SPHK2Q9NRA0 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC21.65■■□□□ 1.06
SPHK2Q9NRA0 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
SPHK2Q9NRA0 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC21.65■■□□□ 1.06
SPHK2Q9NRA0 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC21.65■■□□□ 1.06
SPHK2Q9NRA0 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC21.65■■□□□ 1.06
SPHK2Q9NRA0 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC21.65■■□□□ 1.06
SPHK2Q9NRA0 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
SPHK2Q9NRA0 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SPHK2Q9NRA0 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
SPHK2Q9NRA0 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SPHK2Q9NRA0 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.06
SPHK2Q9NRA0 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
SPHK2Q9NRA0 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
SPHK2Q9NRA0 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SPHK2Q9NRA0 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SPHK2Q9NRA0 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC21.64■■□□□ 1.05
SPHK2Q9NRA0 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC21.64■■□□□ 1.05
SPHK2Q9NRA0 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SPHK2Q9NRA0 AC243732.1-201ENST00000612648 864 ntBASIC21.64■■□□□ 1.05
SPHK2Q9NRA0 OR10C1-204ENST00000622521 1039 ntBASIC21.64■■□□□ 1.05
SPHK2Q9NRA0 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC21.64■■□□□ 1.05
SPHK2Q9NRA0 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
SPHK2Q9NRA0 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SPHK2Q9NRA0 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SPHK2Q9NRA0 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC21.64■■□□□ 1.05
SPHK2Q9NRA0 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC21.64■■□□□ 1.05
SPHK2Q9NRA0 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SPHK2Q9NRA0 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
SPHK2Q9NRA0 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
SPHK2Q9NRA0 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SPHK2Q9NRA0 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SPHK2Q9NRA0 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
SPHK2Q9NRA0 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SPHK2Q9NRA0 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC21.63■■□□□ 1.05
SPHK2Q9NRA0 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC21.63■■□□□ 1.05
SPHK2Q9NRA0 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
SPHK2Q9NRA0 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SPHK2Q9NRA0 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC21.63■■□□□ 1.05
SPHK2Q9NRA0 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC21.63■■□□□ 1.05
SPHK2Q9NRA0 AC069236.1-201ENST00000604339 616 ntBASIC21.63■■□□□ 1.05
SPHK2Q9NRA0 AC008694.1-202ENST00000636953 945 ntBASIC21.63■■□□□ 1.05
SPHK2Q9NRA0 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC21.63■■□□□ 1.05
SPHK2Q9NRA0 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC21.63■■□□□ 1.05
SPHK2Q9NRA0 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SPHK2Q9NRA0 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
SPHK2Q9NRA0 FAM99A-202ENST00000538190 1989 ntBASIC21.63■■□□□ 1.05
SPHK2Q9NRA0 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SPHK2Q9NRA0 AC010542.4-201ENST00000563151 1910 ntBASIC21.63■■□□□ 1.05
SPHK2Q9NRA0 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
SPHK2Q9NRA0 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SPHK2Q9NRA0 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC21.62■■□□□ 1.05
SPHK2Q9NRA0 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
SPHK2Q9NRA0 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC21.62■■□□□ 1.05
SPHK2Q9NRA0 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
SPHK2Q9NRA0 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC21.62■■□□□ 1.05
SPHK2Q9NRA0 AC069152.1-201ENST00000438030 544 ntBASIC21.62■■□□□ 1.05
SPHK2Q9NRA0 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms