Protein–RNA interactions for Protein: Q9HCI7

MSL2, E3 ubiquitin-protein ligase MSL2, humanhuman

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSL2Q9HCI7 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
MSL2Q9HCI7 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
MSL2Q9HCI7 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
MSL2Q9HCI7 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
MSL2Q9HCI7 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC18.15■□□□□ 0.5
MSL2Q9HCI7 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC18.15■□□□□ 0.5
MSL2Q9HCI7 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
MSL2Q9HCI7 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC18.15■□□□□ 0.5
MSL2Q9HCI7 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
MSL2Q9HCI7 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
MSL2Q9HCI7 AC004854.2-201ENST00000608450 1441 ntBASIC18.15■□□□□ 0.5
MSL2Q9HCI7 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC18.14■□□□□ 0.5
MSL2Q9HCI7 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
MSL2Q9HCI7 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
MSL2Q9HCI7 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
MSL2Q9HCI7 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
MSL2Q9HCI7 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
MSL2Q9HCI7 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC18.14■□□□□ 0.49
MSL2Q9HCI7 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC18.14■□□□□ 0.49
MSL2Q9HCI7 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
MSL2Q9HCI7 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
MSL2Q9HCI7 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC18.14■□□□□ 0.49
MSL2Q9HCI7 KRT18P5-201ENST00000436075 1291 ntBASIC18.14■□□□□ 0.49
MSL2Q9HCI7 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
MSL2Q9HCI7 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC18.14■□□□□ 0.49
MSL2Q9HCI7 FBXW4P1-201ENST00000426721 2239 ntBASIC18.14■□□□□ 0.49
MSL2Q9HCI7 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
MSL2Q9HCI7 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC18.14■□□□□ 0.49
MSL2Q9HCI7 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC18.14■□□□□ 0.49
MSL2Q9HCI7 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC18.13■□□□□ 0.49
MSL2Q9HCI7 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
MSL2Q9HCI7 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
MSL2Q9HCI7 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
MSL2Q9HCI7 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
MSL2Q9HCI7 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
MSL2Q9HCI7 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
MSL2Q9HCI7 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC18.13■□□□□ 0.49
MSL2Q9HCI7 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
MSL2Q9HCI7 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC18.13■□□□□ 0.49
MSL2Q9HCI7 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC18.13■□□□□ 0.49
MSL2Q9HCI7 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
MSL2Q9HCI7 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC18.13■□□□□ 0.49
MSL2Q9HCI7 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
MSL2Q9HCI7 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC18.13■□□□□ 0.49
MSL2Q9HCI7 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
MSL2Q9HCI7 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
MSL2Q9HCI7 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
MSL2Q9HCI7 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC18.13■□□□□ 0.49
MSL2Q9HCI7 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
MSL2Q9HCI7 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
MSL2Q9HCI7 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
MSL2Q9HCI7 AP004607.4-201ENST00000530158 1459 ntBASIC18.13■□□□□ 0.49
MSL2Q9HCI7 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC18.13■□□□□ 0.49
MSL2Q9HCI7 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
MSL2Q9HCI7 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
MSL2Q9HCI7 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
MSL2Q9HCI7 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
MSL2Q9HCI7 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
MSL2Q9HCI7 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
MSL2Q9HCI7 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC18.12■□□□□ 0.49
MSL2Q9HCI7 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
MSL2Q9HCI7 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC18.12■□□□□ 0.49
MSL2Q9HCI7 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC18.12■□□□□ 0.49
MSL2Q9HCI7 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
MSL2Q9HCI7 TESC-206ENST00000541210 936 ntTSL 3 BASIC18.12■□□□□ 0.49
MSL2Q9HCI7 GALNS-213ENST00000569433 723 ntTSL 3 BASIC18.12■□□□□ 0.49
MSL2Q9HCI7 KRT18P61-201ENST00000585825 1298 ntBASIC18.12■□□□□ 0.49
MSL2Q9HCI7 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC18.12■□□□□ 0.49
MSL2Q9HCI7 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC18.12■□□□□ 0.49
MSL2Q9HCI7 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC18.12■□□□□ 0.49
MSL2Q9HCI7 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
MSL2Q9HCI7 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
MSL2Q9HCI7 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
MSL2Q9HCI7 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
MSL2Q9HCI7 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
MSL2Q9HCI7 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
MSL2Q9HCI7 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
MSL2Q9HCI7 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
MSL2Q9HCI7 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
MSL2Q9HCI7 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC18.11■□□□□ 0.49
MSL2Q9HCI7 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC18.11■□□□□ 0.49
MSL2Q9HCI7 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC18.11■□□□□ 0.49
MSL2Q9HCI7 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
MSL2Q9HCI7 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
MSL2Q9HCI7 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
MSL2Q9HCI7 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
MSL2Q9HCI7 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
MSL2Q9HCI7 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
MSL2Q9HCI7 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
MSL2Q9HCI7 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
MSL2Q9HCI7 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC18.11■□□□□ 0.49
MSL2Q9HCI7 LINC00565-201ENST00000562710 2331 ntBASIC18.11■□□□□ 0.49
MSL2Q9HCI7 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
MSL2Q9HCI7 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
MSL2Q9HCI7 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
MSL2Q9HCI7 AL024507.2-201ENST00000606070 2574 ntBASIC18.1■□□□□ 0.49
MSL2Q9HCI7 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC18.1■□□□□ 0.49
MSL2Q9HCI7 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
MSL2Q9HCI7 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
MSL2Q9HCI7 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms