Protein–RNA interactions for Protein: Q9HBF4

ZFYVE1, Zinc finger FYVE domain-containing protein 1, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE1Q9HBF4 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC21.21■□□□□ 0.99
ZFYVE1Q9HBF4 AC004854.2-201ENST00000608450 1441 ntBASIC21.21■□□□□ 0.99
ZFYVE1Q9HBF4 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ZFYVE1Q9HBF4 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ZFYVE1Q9HBF4 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC21.2■□□□□ 0.98
ZFYVE1Q9HBF4 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC21.2■□□□□ 0.98
ZFYVE1Q9HBF4 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC21.2■□□□□ 0.98
ZFYVE1Q9HBF4 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC21.2■□□□□ 0.98
ZFYVE1Q9HBF4 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
ZFYVE1Q9HBF4 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC21.2■□□□□ 0.98
ZFYVE1Q9HBF4 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ZFYVE1Q9HBF4 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
ZFYVE1Q9HBF4 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC21.19■□□□□ 0.98
ZFYVE1Q9HBF4 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ZFYVE1Q9HBF4 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC21.19■□□□□ 0.98
ZFYVE1Q9HBF4 AL162430.1-201ENST00000480705 870 ntBASIC21.19■□□□□ 0.98
ZFYVE1Q9HBF4 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC21.19■□□□□ 0.98
ZFYVE1Q9HBF4 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC21.19■□□□□ 0.98
ZFYVE1Q9HBF4 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC21.19■□□□□ 0.98
ZFYVE1Q9HBF4 GALNS-213ENST00000569433 723 ntTSL 3 BASIC21.19■□□□□ 0.98
ZFYVE1Q9HBF4 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC21.19■□□□□ 0.98
ZFYVE1Q9HBF4 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
ZFYVE1Q9HBF4 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC21.19■□□□□ 0.98
ZFYVE1Q9HBF4 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
ZFYVE1Q9HBF4 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ZFYVE1Q9HBF4 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ZFYVE1Q9HBF4 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
ZFYVE1Q9HBF4 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ZFYVE1Q9HBF4 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ZFYVE1Q9HBF4 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC21.18■□□□□ 0.98
ZFYVE1Q9HBF4 KRT18P5-201ENST00000436075 1291 ntBASIC21.18■□□□□ 0.98
ZFYVE1Q9HBF4 RNF146-206ENST00000480444 843 ntTSL 2 BASIC21.18■□□□□ 0.98
ZFYVE1Q9HBF4 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ZFYVE1Q9HBF4 AC104187.1-201ENST00000607510 612 ntBASIC21.18■□□□□ 0.98
ZFYVE1Q9HBF4 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ZFYVE1Q9HBF4 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC21.17■□□□□ 0.98
ZFYVE1Q9HBF4 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ZFYVE1Q9HBF4 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC21.17■□□□□ 0.98
ZFYVE1Q9HBF4 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC21.17■□□□□ 0.98
ZFYVE1Q9HBF4 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC21.17■□□□□ 0.98
ZFYVE1Q9HBF4 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC21.17■□□□□ 0.98
ZFYVE1Q9HBF4 SERP1-208ENST00000491660 830 ntTSL 2 BASIC21.17■□□□□ 0.98
ZFYVE1Q9HBF4 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC21.17■□□□□ 0.98
ZFYVE1Q9HBF4 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC21.17■□□□□ 0.98
ZFYVE1Q9HBF4 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC21.17■□□□□ 0.98
ZFYVE1Q9HBF4 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
ZFYVE1Q9HBF4 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ZFYVE1Q9HBF4 RARG-204ENST00000543726 1779 ntTSL 2 BASIC21.17■□□□□ 0.98
ZFYVE1Q9HBF4 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ZFYVE1Q9HBF4 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
ZFYVE1Q9HBF4 AC244015.2-201ENST00000616358 1861 ntBASIC21.17■□□□□ 0.98
ZFYVE1Q9HBF4 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC21.17■□□□□ 0.98
ZFYVE1Q9HBF4 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ZFYVE1Q9HBF4 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
ZFYVE1Q9HBF4 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC21.17■□□□□ 0.98
ZFYVE1Q9HBF4 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC21.17■□□□□ 0.98
ZFYVE1Q9HBF4 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ZFYVE1Q9HBF4 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ZFYVE1Q9HBF4 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ZFYVE1Q9HBF4 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ZFYVE1Q9HBF4 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ZFYVE1Q9HBF4 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.16■□□□□ 0.98
ZFYVE1Q9HBF4 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ZFYVE1Q9HBF4 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ZFYVE1Q9HBF4 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ZFYVE1Q9HBF4 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
ZFYVE1Q9HBF4 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
ZFYVE1Q9HBF4 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ZFYVE1Q9HBF4 KRT19P1-201ENST00000405746 1186 ntBASIC21.16■□□□□ 0.98
ZFYVE1Q9HBF4 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ZFYVE1Q9HBF4 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC21.16■□□□□ 0.98
ZFYVE1Q9HBF4 KRT18P61-201ENST00000585825 1298 ntBASIC21.16■□□□□ 0.98
ZFYVE1Q9HBF4 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
ZFYVE1Q9HBF4 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC21.16■□□□□ 0.98
ZFYVE1Q9HBF4 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.16■□□□□ 0.98
ZFYVE1Q9HBF4 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ZFYVE1Q9HBF4 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC21.16■□□□□ 0.98
ZFYVE1Q9HBF4 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ZFYVE1Q9HBF4 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
ZFYVE1Q9HBF4 MFF-203ENST00000349901 1716 ntTSL 2 BASIC21.15■□□□□ 0.98
ZFYVE1Q9HBF4 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
ZFYVE1Q9HBF4 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ZFYVE1Q9HBF4 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ZFYVE1Q9HBF4 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
ZFYVE1Q9HBF4 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
ZFYVE1Q9HBF4 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC21.15■□□□□ 0.98
ZFYVE1Q9HBF4 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC21.15■□□□□ 0.98
ZFYVE1Q9HBF4 AC138907.5-202ENST00000569484 235 ntBASIC21.15■□□□□ 0.98
ZFYVE1Q9HBF4 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC21.15■□□□□ 0.98
ZFYVE1Q9HBF4 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ZFYVE1Q9HBF4 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
ZFYVE1Q9HBF4 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ZFYVE1Q9HBF4 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
ZFYVE1Q9HBF4 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
ZFYVE1Q9HBF4 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
ZFYVE1Q9HBF4 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
ZFYVE1Q9HBF4 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC21.14■□□□□ 0.98
ZFYVE1Q9HBF4 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
ZFYVE1Q9HBF4 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
ZFYVE1Q9HBF4 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms