Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC21.46■■□□□ 1.03
LRRC40Q9H9A6 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
LRRC40Q9H9A6 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
LRRC40Q9H9A6 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
LRRC40Q9H9A6 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
LRRC40Q9H9A6 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
LRRC40Q9H9A6 FXN-202ENST00000396364 980 ntTSL 5 BASIC21.46■■□□□ 1.03
LRRC40Q9H9A6 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC21.46■■□□□ 1.03
LRRC40Q9H9A6 AL354811.1-201ENST00000610286 706 ntBASIC21.46■■□□□ 1.03
LRRC40Q9H9A6 AC005837.3-201ENST00000612163 286 ntBASIC21.46■■□□□ 1.03
LRRC40Q9H9A6 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.03
LRRC40Q9H9A6 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
LRRC40Q9H9A6 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
LRRC40Q9H9A6 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
LRRC40Q9H9A6 DYM-203ENST00000442713 2147 ntTSL 2 BASIC21.45■■□□□ 1.02
LRRC40Q9H9A6 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
LRRC40Q9H9A6 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
LRRC40Q9H9A6 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
LRRC40Q9H9A6 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
LRRC40Q9H9A6 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
LRRC40Q9H9A6 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
LRRC40Q9H9A6 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
LRRC40Q9H9A6 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
LRRC40Q9H9A6 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
LRRC40Q9H9A6 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
LRRC40Q9H9A6 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
LRRC40Q9H9A6 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC21.45■■□□□ 1.02
LRRC40Q9H9A6 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC21.45■■□□□ 1.02
LRRC40Q9H9A6 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
LRRC40Q9H9A6 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
LRRC40Q9H9A6 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC21.44■■□□□ 1.02
LRRC40Q9H9A6 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
LRRC40Q9H9A6 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
LRRC40Q9H9A6 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
LRRC40Q9H9A6 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
LRRC40Q9H9A6 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
LRRC40Q9H9A6 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC21.44■■□□□ 1.02
LRRC40Q9H9A6 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC21.44■■□□□ 1.02
LRRC40Q9H9A6 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
LRRC40Q9H9A6 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
LRRC40Q9H9A6 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
LRRC40Q9H9A6 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
LRRC40Q9H9A6 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC21.44■■□□□ 1.02
LRRC40Q9H9A6 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC21.43■■□□□ 1.02
LRRC40Q9H9A6 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.43■■□□□ 1.02
LRRC40Q9H9A6 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
LRRC40Q9H9A6 AL358852.1-201ENST00000623174 1268 ntBASIC21.43■■□□□ 1.02
LRRC40Q9H9A6 AF106564.1-201ENST00000607058 2553 ntBASIC21.43■■□□□ 1.02
LRRC40Q9H9A6 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC21.43■■□□□ 1.02
LRRC40Q9H9A6 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC21.43■■□□□ 1.02
LRRC40Q9H9A6 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
LRRC40Q9H9A6 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
LRRC40Q9H9A6 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC21.43■■□□□ 1.02
LRRC40Q9H9A6 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC21.43■■□□□ 1.02
LRRC40Q9H9A6 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC21.43■■□□□ 1.02
LRRC40Q9H9A6 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21.43■■□□□ 1.02
LRRC40Q9H9A6 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
LRRC40Q9H9A6 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
LRRC40Q9H9A6 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
LRRC40Q9H9A6 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
LRRC40Q9H9A6 HYI-206ENST00000372434 1025 ntTSL 5 BASIC21.42■■□□□ 1.02
LRRC40Q9H9A6 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC21.42■■□□□ 1.02
LRRC40Q9H9A6 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
LRRC40Q9H9A6 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
LRRC40Q9H9A6 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
LRRC40Q9H9A6 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC21.42■■□□□ 1.02
LRRC40Q9H9A6 RHOF-204ENST00000537265 699 ntTSL 2 BASIC21.42■■□□□ 1.02
LRRC40Q9H9A6 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC21.42■■□□□ 1.02
LRRC40Q9H9A6 AL024507.2-201ENST00000606070 2574 ntBASIC21.42■■□□□ 1.02
LRRC40Q9H9A6 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
LRRC40Q9H9A6 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
LRRC40Q9H9A6 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
LRRC40Q9H9A6 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
LRRC40Q9H9A6 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
LRRC40Q9H9A6 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC21.41■■□□□ 1.02
LRRC40Q9H9A6 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
LRRC40Q9H9A6 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
LRRC40Q9H9A6 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
LRRC40Q9H9A6 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC21.41■■□□□ 1.02
LRRC40Q9H9A6 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC21.41■■□□□ 1.02
LRRC40Q9H9A6 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC21.41■■□□□ 1.02
LRRC40Q9H9A6 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC21.41■■□□□ 1.02
LRRC40Q9H9A6 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC21.41■■□□□ 1.02
LRRC40Q9H9A6 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
LRRC40Q9H9A6 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC21.41■■□□□ 1.02
LRRC40Q9H9A6 PARN-205ENST00000539279 1557 ntTSL 2 BASIC21.4■■□□□ 1.02
LRRC40Q9H9A6 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
LRRC40Q9H9A6 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
LRRC40Q9H9A6 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
LRRC40Q9H9A6 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
LRRC40Q9H9A6 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC21.4■■□□□ 1.02
LRRC40Q9H9A6 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
LRRC40Q9H9A6 MIR638-201ENST00000385237 100 ntBASIC21.4■■□□□ 1.02
LRRC40Q9H9A6 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
LRRC40Q9H9A6 STOX2-205ENST00000513034 807 ntTSL 3 BASIC21.4■■□□□ 1.02
LRRC40Q9H9A6 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC21.4■■□□□ 1.02
LRRC40Q9H9A6 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC21.4■■□□□ 1.02
LRRC40Q9H9A6 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
LRRC40Q9H9A6 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
LRRC40Q9H9A6 NARF-205ENST00000412079 1760 ntTSL 5 BASIC21.4■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms