Protein–RNA interactions for Protein: Q9H269

VPS16, Vacuolar protein sorting-associated protein 16 homolog, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16Q9H269 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC23.19■■□□□ 1.3
VPS16Q9H269 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
VPS16Q9H269 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC23.19■■□□□ 1.3
VPS16Q9H269 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
VPS16Q9H269 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
VPS16Q9H269 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
VPS16Q9H269 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
VPS16Q9H269 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
VPS16Q9H269 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC23.19■■□□□ 1.3
VPS16Q9H269 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
VPS16Q9H269 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC23.19■■□□□ 1.3
VPS16Q9H269 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
VPS16Q9H269 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
VPS16Q9H269 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC23.18■■□□□ 1.3
VPS16Q9H269 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
VPS16Q9H269 MIR4767-201ENST00000582827 78 ntBASIC23.18■■□□□ 1.3
VPS16Q9H269 SMUG1P1-201ENST00000590640 811 ntBASIC23.18■■□□□ 1.3
VPS16Q9H269 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC23.18■■□□□ 1.3
VPS16Q9H269 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
VPS16Q9H269 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC23.18■■□□□ 1.3
VPS16Q9H269 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
VPS16Q9H269 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
VPS16Q9H269 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
VPS16Q9H269 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
VPS16Q9H269 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC23.18■■□□□ 1.3
VPS16Q9H269 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
VPS16Q9H269 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
VPS16Q9H269 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC23.17■■□□□ 1.3
VPS16Q9H269 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
VPS16Q9H269 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
VPS16Q9H269 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
VPS16Q9H269 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
VPS16Q9H269 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
VPS16Q9H269 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
VPS16Q9H269 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
VPS16Q9H269 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
VPS16Q9H269 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC23.17■■□□□ 1.3
VPS16Q9H269 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
VPS16Q9H269 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
VPS16Q9H269 UNC93B3-201ENST00000308076 687 ntBASIC23.17■■□□□ 1.3
VPS16Q9H269 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC23.17■■□□□ 1.3
VPS16Q9H269 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
VPS16Q9H269 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC23.17■■□□□ 1.3
VPS16Q9H269 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC23.17■■□□□ 1.3
VPS16Q9H269 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC23.17■■□□□ 1.3
VPS16Q9H269 PARN-205ENST00000539279 1557 ntTSL 2 BASIC23.17■■□□□ 1.3
VPS16Q9H269 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
VPS16Q9H269 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC23.17■■□□□ 1.3
VPS16Q9H269 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
VPS16Q9H269 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
VPS16Q9H269 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
VPS16Q9H269 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC23.16■■□□□ 1.3
VPS16Q9H269 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
VPS16Q9H269 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
VPS16Q9H269 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
VPS16Q9H269 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC23.16■■□□□ 1.3
VPS16Q9H269 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC23.16■■□□□ 1.3
VPS16Q9H269 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
VPS16Q9H269 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
VPS16Q9H269 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
VPS16Q9H269 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
VPS16Q9H269 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC23.16■■□□□ 1.3
VPS16Q9H269 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
VPS16Q9H269 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
VPS16Q9H269 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC23.15■■□□□ 1.3
VPS16Q9H269 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
VPS16Q9H269 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC23.15■■□□□ 1.3
VPS16Q9H269 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
VPS16Q9H269 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
VPS16Q9H269 ASL-203ENST00000380839 1765 ntTSL 5 BASIC23.15■■□□□ 1.3
VPS16Q9H269 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
VPS16Q9H269 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC23.15■■□□□ 1.3
VPS16Q9H269 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
VPS16Q9H269 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC23.15■■□□□ 1.3
VPS16Q9H269 BX842568.3-201ENST00000418104 571 ntBASIC23.15■■□□□ 1.3
VPS16Q9H269 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC23.15■■□□□ 1.3
VPS16Q9H269 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC23.15■■□□□ 1.3
VPS16Q9H269 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
VPS16Q9H269 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC23.15■■□□□ 1.3
VPS16Q9H269 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
VPS16Q9H269 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC23.15■■□□□ 1.3
VPS16Q9H269 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
VPS16Q9H269 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
VPS16Q9H269 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
VPS16Q9H269 PXK-203ENST00000383715 1756 ntTSL 5 BASIC23.14■■□□□ 1.3
VPS16Q9H269 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.3
VPS16Q9H269 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC23.14■■□□□ 1.3
VPS16Q9H269 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
VPS16Q9H269 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
VPS16Q9H269 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.3
VPS16Q9H269 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
VPS16Q9H269 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
VPS16Q9H269 AC133561.4-201ENST00000566112 224 ntBASIC23.14■■□□□ 1.29
VPS16Q9H269 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
VPS16Q9H269 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
VPS16Q9H269 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
VPS16Q9H269 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC23.14■■□□□ 1.29
VPS16Q9H269 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
VPS16Q9H269 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
VPS16Q9H269 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms