Protein–RNA interactions for Protein: Q9H000

MKRN2, Probable E3 ubiquitin-protein ligase makorin-2, humanhuman

Known RBP Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKRN2Q9H000 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
MKRN2Q9H000 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
MKRN2Q9H000 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
MKRN2Q9H000 BET1L-204ENST00000410108 637 ntTSL 3 BASIC21.3■■□□□ 1
MKRN2Q9H000 POU5F1P4-201ENST00000413175 1085 ntBASIC21.3■■□□□ 1
MKRN2Q9H000 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
MKRN2Q9H000 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
MKRN2Q9H000 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC21.3■■□□□ 1
MKRN2Q9H000 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC21.3■■□□□ 1
MKRN2Q9H000 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC21.3■■□□□ 1
MKRN2Q9H000 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC21.3■■□□□ 1
MKRN2Q9H000 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC21.3■■□□□ 1
MKRN2Q9H000 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC21.3■■□□□ 1
MKRN2Q9H000 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
MKRN2Q9H000 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC21.29■■□□□ 1
MKRN2Q9H000 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
MKRN2Q9H000 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
MKRN2Q9H000 AC012676.1-201ENST00000574705 1949 ntBASIC21.29■■□□□ 1
MKRN2Q9H000 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
MKRN2Q9H000 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC21.29■■□□□ 1
MKRN2Q9H000 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
MKRN2Q9H000 AC003102.1-202ENST00000563394 1796 ntBASIC21.29■■□□□ 1
MKRN2Q9H000 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
MKRN2Q9H000 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC21.29■■□□□ 1
MKRN2Q9H000 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC21.29■■□□□ 1
MKRN2Q9H000 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC21.29■■□□□ 1
MKRN2Q9H000 MIR4651-201ENST00000582622 73 ntBASIC21.29■■□□□ 1
MKRN2Q9H000 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
MKRN2Q9H000 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
MKRN2Q9H000 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
MKRN2Q9H000 RARG-204ENST00000543726 1779 ntTSL 2 BASIC21.28■■□□□ 1
MKRN2Q9H000 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
MKRN2Q9H000 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC21.28■■□□□ 1
MKRN2Q9H000 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
MKRN2Q9H000 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC21.28■■□□□ 1
MKRN2Q9H000 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC21.28■■□□□ 1
MKRN2Q9H000 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC21.28■■□□□ 1
MKRN2Q9H000 MIPEPP3-201ENST00000412105 444 ntBASIC21.28■■□□□ 1
MKRN2Q9H000 AC093787.1-201ENST00000450396 207 ntBASIC21.28■■□□□ 1
MKRN2Q9H000 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC21.28■■□□□ 1
MKRN2Q9H000 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC21.28■■□□□ 1
MKRN2Q9H000 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC21.28■■□□□ 1
MKRN2Q9H000 OR10C1-204ENST00000622521 1039 ntBASIC21.28■■□□□ 1
MKRN2Q9H000 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC21.28■■□□□ 1
MKRN2Q9H000 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.28■■□□□ 1
MKRN2Q9H000 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC21.28■■□□□ 1
MKRN2Q9H000 MKRN4P-201ENST00000444706 1521 ntBASIC21.28■■□□□ 1
MKRN2Q9H000 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC21.28■■□□□ 1
MKRN2Q9H000 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
MKRN2Q9H000 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
MKRN2Q9H000 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
MKRN2Q9H000 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
MKRN2Q9H000 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC21.27■■□□□ 1
MKRN2Q9H000 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC21.27■■□□□ 1
MKRN2Q9H000 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC21.27■■□□□ 1
MKRN2Q9H000 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC21.27■■□□□ 1
MKRN2Q9H000 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
MKRN2Q9H000 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC21.27■■□□□ 1
MKRN2Q9H000 PHB2-213ENST00000546111 858 ntTSL 2 BASIC21.27■■□□□ 1
MKRN2Q9H000 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC21.27■■□□□ 1
MKRN2Q9H000 AC016405.3-201ENST00000607710 860 ntBASIC21.27■■□□□ 1
MKRN2Q9H000 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC21.27■■□□□ 1
MKRN2Q9H000 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC21.27■■□□□ 1
MKRN2Q9H000 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC21.27■■□□□ 1
MKRN2Q9H000 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
MKRN2Q9H000 KRT16P2-201ENST00000414673 1423 ntBASIC21.27■■□□□ 1
MKRN2Q9H000 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
MKRN2Q9H000 C9orf163-202ENST00000624034 2573 ntBASIC21.27■□□□□ 0.99
MKRN2Q9H000 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC21.27■□□□□ 0.99
MKRN2Q9H000 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC21.27■□□□□ 0.99
MKRN2Q9H000 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC21.27■□□□□ 0.99
MKRN2Q9H000 CASK-201ENST00000378154 2494 ntTSL 5 BASIC21.27■□□□□ 0.99
MKRN2Q9H000 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC21.27■□□□□ 0.99
MKRN2Q9H000 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
MKRN2Q9H000 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
MKRN2Q9H000 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC21.26■□□□□ 0.99
MKRN2Q9H000 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
MKRN2Q9H000 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
MKRN2Q9H000 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
MKRN2Q9H000 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
MKRN2Q9H000 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
MKRN2Q9H000 MIR4758-201ENST00000577688 71 ntBASIC21.26■□□□□ 0.99
MKRN2Q9H000 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
MKRN2Q9H000 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
MKRN2Q9H000 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
MKRN2Q9H000 AC061975.6-201ENST00000579045 1553 ntBASIC21.26■□□□□ 0.99
MKRN2Q9H000 C1orf229-201ENST00000623686 2258 ntBASIC21.26■□□□□ 0.99
MKRN2Q9H000 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC21.26■□□□□ 0.99
MKRN2Q9H000 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
MKRN2Q9H000 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC21.25■□□□□ 0.99
MKRN2Q9H000 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
MKRN2Q9H000 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC21.25■□□□□ 0.99
MKRN2Q9H000 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC21.25■□□□□ 0.99
MKRN2Q9H000 AC069236.1-201ENST00000604339 616 ntBASIC21.25■□□□□ 0.99
MKRN2Q9H000 FGF8-207ENST00000618991 856 ntTSL 3 BASIC21.25■□□□□ 0.99
MKRN2Q9H000 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
MKRN2Q9H000 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC21.25■□□□□ 0.99
MKRN2Q9H000 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC21.25■□□□□ 0.99
MKRN2Q9H000 AC008694.1-202ENST00000636953 945 ntBASIC21.25■□□□□ 0.99
MKRN2Q9H000 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms