Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.74■□□□□ 0.75
AMBRA1Q9C0C7 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
AMBRA1Q9C0C7 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
AMBRA1Q9C0C7 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
AMBRA1Q9C0C7 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC19.73■□□□□ 0.75
AMBRA1Q9C0C7 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
AMBRA1Q9C0C7 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
AMBRA1Q9C0C7 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
AMBRA1Q9C0C7 AC010141.3-201ENST00000456659 717 ntBASIC19.73■□□□□ 0.75
AMBRA1Q9C0C7 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC19.73■□□□□ 0.75
AMBRA1Q9C0C7 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC19.73■□□□□ 0.75
AMBRA1Q9C0C7 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
AMBRA1Q9C0C7 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
AMBRA1Q9C0C7 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.73■□□□□ 0.75
AMBRA1Q9C0C7 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.73■□□□□ 0.75
AMBRA1Q9C0C7 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.73■□□□□ 0.75
AMBRA1Q9C0C7 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.73■□□□□ 0.75
AMBRA1Q9C0C7 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.73■□□□□ 0.75
AMBRA1Q9C0C7 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
AMBRA1Q9C0C7 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.73■□□□□ 0.75
AMBRA1Q9C0C7 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
AMBRA1Q9C0C7 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC19.72■□□□□ 0.75
AMBRA1Q9C0C7 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
AMBRA1Q9C0C7 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
AMBRA1Q9C0C7 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.72■□□□□ 0.75
AMBRA1Q9C0C7 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
AMBRA1Q9C0C7 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
AMBRA1Q9C0C7 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
AMBRA1Q9C0C7 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
AMBRA1Q9C0C7 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
AMBRA1Q9C0C7 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
AMBRA1Q9C0C7 DUX4L19-201ENST00000557448 1267 ntBASIC19.72■□□□□ 0.75
AMBRA1Q9C0C7 AC010525.1-201ENST00000585559 441 ntBASIC19.72■□□□□ 0.75
AMBRA1Q9C0C7 AL139246.5-201ENST00000606645 996 ntBASIC19.72■□□□□ 0.75
AMBRA1Q9C0C7 AC110285.6-201ENST00000617652 491 ntBASIC19.72■□□□□ 0.75
AMBRA1Q9C0C7 AC087239.1-201ENST00000622671 572 ntBASIC19.72■□□□□ 0.75
AMBRA1Q9C0C7 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC19.72■□□□□ 0.75
AMBRA1Q9C0C7 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
AMBRA1Q9C0C7 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
AMBRA1Q9C0C7 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
AMBRA1Q9C0C7 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
AMBRA1Q9C0C7 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.72■□□□□ 0.75
AMBRA1Q9C0C7 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
AMBRA1Q9C0C7 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
AMBRA1Q9C0C7 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
AMBRA1Q9C0C7 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
AMBRA1Q9C0C7 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
AMBRA1Q9C0C7 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
AMBRA1Q9C0C7 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
AMBRA1Q9C0C7 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.71■□□□□ 0.75
AMBRA1Q9C0C7 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC19.71■□□□□ 0.75
AMBRA1Q9C0C7 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC19.71■□□□□ 0.75
AMBRA1Q9C0C7 SF1-220ENST00000626028 704 ntTSL 2 BASIC19.71■□□□□ 0.75
AMBRA1Q9C0C7 AC007952.6-201ENST00000573168 2673 ntBASIC19.71■□□□□ 0.75
AMBRA1Q9C0C7 AC003957.1-201ENST00000625108 2673 ntBASIC19.71■□□□□ 0.75
AMBRA1Q9C0C7 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
AMBRA1Q9C0C7 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
AMBRA1Q9C0C7 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
AMBRA1Q9C0C7 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
AMBRA1Q9C0C7 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
AMBRA1Q9C0C7 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
AMBRA1Q9C0C7 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
AMBRA1Q9C0C7 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
AMBRA1Q9C0C7 NALT1-201ENST00000429224 738 ntTSL 5 BASIC19.7■□□□□ 0.74
AMBRA1Q9C0C7 AC096631.2-201ENST00000436136 790 ntBASIC19.7■□□□□ 0.74
AMBRA1Q9C0C7 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC19.7■□□□□ 0.74
AMBRA1Q9C0C7 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC19.7■□□□□ 0.74
AMBRA1Q9C0C7 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
AMBRA1Q9C0C7 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
AMBRA1Q9C0C7 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
AMBRA1Q9C0C7 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
AMBRA1Q9C0C7 OXCT2P1-201ENST00000447263 1535 ntBASIC19.7■□□□□ 0.74
AMBRA1Q9C0C7 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
AMBRA1Q9C0C7 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
AMBRA1Q9C0C7 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
AMBRA1Q9C0C7 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
AMBRA1Q9C0C7 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
AMBRA1Q9C0C7 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
AMBRA1Q9C0C7 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
AMBRA1Q9C0C7 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
AMBRA1Q9C0C7 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
AMBRA1Q9C0C7 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
AMBRA1Q9C0C7 RNF165-205ENST00000588679 2904 ntBASIC19.69■□□□□ 0.74
AMBRA1Q9C0C7 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
AMBRA1Q9C0C7 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
AMBRA1Q9C0C7 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
AMBRA1Q9C0C7 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
AMBRA1Q9C0C7 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
AMBRA1Q9C0C7 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
AMBRA1Q9C0C7 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
AMBRA1Q9C0C7 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
AMBRA1Q9C0C7 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.68■□□□□ 0.74
AMBRA1Q9C0C7 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.68■□□□□ 0.74
AMBRA1Q9C0C7 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
AMBRA1Q9C0C7 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
AMBRA1Q9C0C7 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
AMBRA1Q9C0C7 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
AMBRA1Q9C0C7 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
AMBRA1Q9C0C7 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
AMBRA1Q9C0C7 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms