Protein–RNA interactions for Protein: Q9BSH3

NICN1, Nicolin-1, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NICN1Q9BSH3 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
NICN1Q9BSH3 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.1■□□□□ 0.49
NICN1Q9BSH3 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NICN1Q9BSH3 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NICN1Q9BSH3 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
NICN1Q9BSH3 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
NICN1Q9BSH3 AC010141.3-201ENST00000456659 717 ntBASIC18.1■□□□□ 0.49
NICN1Q9BSH3 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
NICN1Q9BSH3 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NICN1Q9BSH3 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
NICN1Q9BSH3 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
NICN1Q9BSH3 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.1■□□□□ 0.49
NICN1Q9BSH3 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC18.1■□□□□ 0.49
NICN1Q9BSH3 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NICN1Q9BSH3 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NICN1Q9BSH3 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
NICN1Q9BSH3 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
NICN1Q9BSH3 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
NICN1Q9BSH3 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
NICN1Q9BSH3 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
NICN1Q9BSH3 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
NICN1Q9BSH3 LINC01006-201ENST00000333319 2292 ntBASIC18.09■□□□□ 0.49
NICN1Q9BSH3 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NICN1Q9BSH3 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC18.09■□□□□ 0.49
NICN1Q9BSH3 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NICN1Q9BSH3 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
NICN1Q9BSH3 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NICN1Q9BSH3 OR2A1-AS1-204ENST00000470435 602 ntBASIC18.09■□□□□ 0.49
NICN1Q9BSH3 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC18.09■□□□□ 0.49
NICN1Q9BSH3 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
NICN1Q9BSH3 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
NICN1Q9BSH3 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
NICN1Q9BSH3 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
NICN1Q9BSH3 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NICN1Q9BSH3 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
NICN1Q9BSH3 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
NICN1Q9BSH3 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
NICN1Q9BSH3 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NICN1Q9BSH3 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
NICN1Q9BSH3 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
NICN1Q9BSH3 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.08■□□□□ 0.49
NICN1Q9BSH3 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
NICN1Q9BSH3 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NICN1Q9BSH3 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NICN1Q9BSH3 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NICN1Q9BSH3 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
NICN1Q9BSH3 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC18.08■□□□□ 0.48
NICN1Q9BSH3 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
NICN1Q9BSH3 AL356740.2-201ENST00000601559 647 ntBASIC18.08■□□□□ 0.48
NICN1Q9BSH3 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC18.08■□□□□ 0.48
NICN1Q9BSH3 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NICN1Q9BSH3 AC003102.1-202ENST00000563394 1796 ntBASIC18.08■□□□□ 0.48
NICN1Q9BSH3 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
NICN1Q9BSH3 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
NICN1Q9BSH3 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
NICN1Q9BSH3 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
NICN1Q9BSH3 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NICN1Q9BSH3 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
NICN1Q9BSH3 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NICN1Q9BSH3 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC18.08■□□□□ 0.48
NICN1Q9BSH3 OXCT2P1-201ENST00000447263 1535 ntBASIC18.08■□□□□ 0.48
NICN1Q9BSH3 AL049796.1-201ENST00000565336 1766 ntBASIC18.07■□□□□ 0.48
NICN1Q9BSH3 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NICN1Q9BSH3 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
NICN1Q9BSH3 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NICN1Q9BSH3 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
NICN1Q9BSH3 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NICN1Q9BSH3 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC18.07■□□□□ 0.48
NICN1Q9BSH3 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC18.07■□□□□ 0.48
NICN1Q9BSH3 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC18.07■□□□□ 0.48
NICN1Q9BSH3 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC18.07■□□□□ 0.48
NICN1Q9BSH3 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NICN1Q9BSH3 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NICN1Q9BSH3 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.07■□□□□ 0.48
NICN1Q9BSH3 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NICN1Q9BSH3 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NICN1Q9BSH3 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NICN1Q9BSH3 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
NICN1Q9BSH3 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NICN1Q9BSH3 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NICN1Q9BSH3 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NICN1Q9BSH3 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NICN1Q9BSH3 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC18.06■□□□□ 0.48
NICN1Q9BSH3 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC18.06■□□□□ 0.48
NICN1Q9BSH3 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
NICN1Q9BSH3 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NICN1Q9BSH3 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NICN1Q9BSH3 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
NICN1Q9BSH3 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NICN1Q9BSH3 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NICN1Q9BSH3 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NICN1Q9BSH3 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NICN1Q9BSH3 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NICN1Q9BSH3 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC18.05■□□□□ 0.48
NICN1Q9BSH3 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NICN1Q9BSH3 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NICN1Q9BSH3 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NICN1Q9BSH3 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NICN1Q9BSH3 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
NICN1Q9BSH3 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms