Protein–RNA interactions for Protein: Q9BQW3

EBF4, Transcription factor COE4, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4Q9BQW3 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.6■□□□□ 0.89
EBF4Q9BQW3 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
EBF4Q9BQW3 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC20.6■□□□□ 0.89
EBF4Q9BQW3 TSPY9P-201ENST00000440215 945 ntBASIC20.6■□□□□ 0.89
EBF4Q9BQW3 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.6■□□□□ 0.89
EBF4Q9BQW3 TSPY11P-201ENST00000442607 1045 ntBASIC20.6■□□□□ 0.89
EBF4Q9BQW3 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
EBF4Q9BQW3 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
EBF4Q9BQW3 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
EBF4Q9BQW3 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.6■□□□□ 0.89
EBF4Q9BQW3 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
EBF4Q9BQW3 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.6■□□□□ 0.89
EBF4Q9BQW3 AFG3L1P-217ENST00000557444 2447 ntBASIC20.59■□□□□ 0.89
EBF4Q9BQW3 PLK5-205ENST00000642079 1969 ntBASIC20.59■□□□□ 0.89
EBF4Q9BQW3 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
EBF4Q9BQW3 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
EBF4Q9BQW3 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.59■□□□□ 0.89
EBF4Q9BQW3 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.59■□□□□ 0.89
EBF4Q9BQW3 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
EBF4Q9BQW3 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
EBF4Q9BQW3 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
EBF4Q9BQW3 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
EBF4Q9BQW3 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
EBF4Q9BQW3 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
EBF4Q9BQW3 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
EBF4Q9BQW3 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.59■□□□□ 0.89
EBF4Q9BQW3 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
EBF4Q9BQW3 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
EBF4Q9BQW3 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.58■□□□□ 0.89
EBF4Q9BQW3 AC006128.1-201ENST00000624704 1661 ntBASIC20.58■□□□□ 0.89
EBF4Q9BQW3 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
EBF4Q9BQW3 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.58■□□□□ 0.89
EBF4Q9BQW3 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC20.58■□□□□ 0.89
EBF4Q9BQW3 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
EBF4Q9BQW3 AC068587.7-201ENST00000641602 218 ntBASIC20.58■□□□□ 0.89
EBF4Q9BQW3 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
EBF4Q9BQW3 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.88
EBF4Q9BQW3 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.58■□□□□ 0.88
EBF4Q9BQW3 RNF165-205ENST00000588679 2904 ntBASIC20.58■□□□□ 0.88
EBF4Q9BQW3 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.58■□□□□ 0.88
EBF4Q9BQW3 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
EBF4Q9BQW3 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.58■□□□□ 0.88
EBF4Q9BQW3 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
EBF4Q9BQW3 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
EBF4Q9BQW3 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
EBF4Q9BQW3 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
EBF4Q9BQW3 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
EBF4Q9BQW3 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.57■□□□□ 0.88
EBF4Q9BQW3 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.57■□□□□ 0.88
EBF4Q9BQW3 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
EBF4Q9BQW3 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
EBF4Q9BQW3 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
EBF4Q9BQW3 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
EBF4Q9BQW3 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
EBF4Q9BQW3 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
EBF4Q9BQW3 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.57■□□□□ 0.88
EBF4Q9BQW3 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.57■□□□□ 0.88
EBF4Q9BQW3 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.57■□□□□ 0.88
EBF4Q9BQW3 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
EBF4Q9BQW3 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
EBF4Q9BQW3 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
EBF4Q9BQW3 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
EBF4Q9BQW3 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
EBF4Q9BQW3 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.56■□□□□ 0.88
EBF4Q9BQW3 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
EBF4Q9BQW3 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
EBF4Q9BQW3 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
EBF4Q9BQW3 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
EBF4Q9BQW3 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
EBF4Q9BQW3 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
EBF4Q9BQW3 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
EBF4Q9BQW3 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
EBF4Q9BQW3 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
EBF4Q9BQW3 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
EBF4Q9BQW3 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.56■□□□□ 0.88
EBF4Q9BQW3 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
EBF4Q9BQW3 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.56■□□□□ 0.88
EBF4Q9BQW3 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
EBF4Q9BQW3 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
EBF4Q9BQW3 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.55■□□□□ 0.88
EBF4Q9BQW3 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
EBF4Q9BQW3 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.55■□□□□ 0.88
EBF4Q9BQW3 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
EBF4Q9BQW3 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
EBF4Q9BQW3 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
EBF4Q9BQW3 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.55■□□□□ 0.88
EBF4Q9BQW3 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
EBF4Q9BQW3 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
EBF4Q9BQW3 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
EBF4Q9BQW3 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.55■□□□□ 0.88
EBF4Q9BQW3 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20.54■□□□□ 0.88
EBF4Q9BQW3 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.54■□□□□ 0.88
EBF4Q9BQW3 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
EBF4Q9BQW3 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.54■□□□□ 0.88
EBF4Q9BQW3 AC010141.3-201ENST00000456659 717 ntBASIC20.54■□□□□ 0.88
EBF4Q9BQW3 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.54■□□□□ 0.88
EBF4Q9BQW3 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC20.54■□□□□ 0.88
EBF4Q9BQW3 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.54■□□□□ 0.88
EBF4Q9BQW3 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.54■□□□□ 0.88
EBF4Q9BQW3 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms