Protein–RNA interactions for Protein: Q99959

PKP2, Plakophilin-2, humanhuman

Predictions only

Length 881 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP2Q99959 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
PKP2Q99959 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PKP2Q99959 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PKP2Q99959 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
PKP2Q99959 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PKP2Q99959 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.88■□□□□ 0.77
PKP2Q99959 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.88■□□□□ 0.77
PKP2Q99959 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PKP2Q99959 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.88■□□□□ 0.77
PKP2Q99959 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PKP2Q99959 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC19.87■□□□□ 0.77
PKP2Q99959 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PKP2Q99959 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PKP2Q99959 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
PKP2Q99959 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.87■□□□□ 0.77
PKP2Q99959 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PKP2Q99959 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
PKP2Q99959 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
PKP2Q99959 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.87■□□□□ 0.77
PKP2Q99959 TK2-202ENST00000417693 1046 ntTSL 2 BASIC19.87■□□□□ 0.77
PKP2Q99959 PVT1_1.1-201ENST00000615125 194 ntBASIC19.87■□□□□ 0.77
PKP2Q99959 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PKP2Q99959 AL020996.1-203ENST00000536896 2307 ntBASIC19.87■□□□□ 0.77
PKP2Q99959 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PKP2Q99959 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PKP2Q99959 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.87■□□□□ 0.77
PKP2Q99959 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
PKP2Q99959 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PKP2Q99959 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.87■□□□□ 0.77
PKP2Q99959 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PKP2Q99959 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PKP2Q99959 OR7E47P-201ENST00000546390 1422 ntBASIC19.86■□□□□ 0.77
PKP2Q99959 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PKP2Q99959 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
PKP2Q99959 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PKP2Q99959 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PKP2Q99959 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.86■□□□□ 0.77
PKP2Q99959 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.86■□□□□ 0.77
PKP2Q99959 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PKP2Q99959 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.86■□□□□ 0.77
PKP2Q99959 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.86■□□□□ 0.77
PKP2Q99959 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.86■□□□□ 0.77
PKP2Q99959 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
PKP2Q99959 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
PKP2Q99959 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
PKP2Q99959 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PKP2Q99959 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
PKP2Q99959 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
PKP2Q99959 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
PKP2Q99959 PLK5-205ENST00000642079 1969 ntBASIC19.85■□□□□ 0.77
PKP2Q99959 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PKP2Q99959 GUK1-208ENST00000366728 842 ntTSL 2 BASIC19.85■□□□□ 0.77
PKP2Q99959 AC074183.2-201ENST00000623112 922 ntBASIC19.85■□□□□ 0.77
PKP2Q99959 EI24-211ENST00000534546 1544 ntTSL 2 BASIC19.85■□□□□ 0.77
PKP2Q99959 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.85■□□□□ 0.77
PKP2Q99959 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.85■□□□□ 0.77
PKP2Q99959 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
PKP2Q99959 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
PKP2Q99959 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
PKP2Q99959 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PKP2Q99959 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
PKP2Q99959 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
PKP2Q99959 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PKP2Q99959 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PKP2Q99959 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC19.84■□□□□ 0.77
PKP2Q99959 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PKP2Q99959 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PKP2Q99959 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.84■□□□□ 0.77
PKP2Q99959 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.84■□□□□ 0.77
PKP2Q99959 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.84■□□□□ 0.77
PKP2Q99959 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
PKP2Q99959 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PKP2Q99959 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
PKP2Q99959 AC027702.1-201ENST00000563810 1770 ntBASIC19.83■□□□□ 0.77
PKP2Q99959 SENP5-202ENST00000419026 973 ntTSL 3 BASIC19.83■□□□□ 0.77
PKP2Q99959 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.83■□□□□ 0.77
PKP2Q99959 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC19.83■□□□□ 0.77
PKP2Q99959 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC19.83■□□□□ 0.77
PKP2Q99959 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.83■□□□□ 0.76
PKP2Q99959 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.83■□□□□ 0.76
PKP2Q99959 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
PKP2Q99959 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
PKP2Q99959 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.83■□□□□ 0.76
PKP2Q99959 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.83■□□□□ 0.76
PKP2Q99959 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC19.83■□□□□ 0.76
PKP2Q99959 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
PKP2Q99959 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PKP2Q99959 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.82■□□□□ 0.76
PKP2Q99959 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.82■□□□□ 0.76
PKP2Q99959 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PKP2Q99959 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PKP2Q99959 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC19.82■□□□□ 0.76
PKP2Q99959 AC010980.1-201ENST00000587192 1142 ntBASIC19.82■□□□□ 0.76
PKP2Q99959 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC19.82■□□□□ 0.76
PKP2Q99959 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC19.82■□□□□ 0.76
PKP2Q99959 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PKP2Q99959 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
PKP2Q99959 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
PKP2Q99959 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
PKP2Q99959 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms