Protein–RNA interactions for Protein: Q99878

HIST1H2AJ, Histone H2A type 1-J, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2AJQ99878 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
HIST1H2AJQ99878 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HIST1H2AJQ99878 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HIST1H2AJQ99878 NT5C3AP1-201ENST00000394500 1012 ntBASIC20.72■□□□□ 0.91
HIST1H2AJQ99878 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
HIST1H2AJQ99878 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC20.72■□□□□ 0.91
HIST1H2AJQ99878 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC20.72■□□□□ 0.91
HIST1H2AJQ99878 Z98882.1-201ENST00000622160 2253 ntBASIC20.72■□□□□ 0.91
HIST1H2AJQ99878 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.72■□□□□ 0.91
HIST1H2AJQ99878 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HIST1H2AJQ99878 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.72■□□□□ 0.91
HIST1H2AJQ99878 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
HIST1H2AJQ99878 AC055733.4-201ENST00000638462 1354 ntBASIC20.72■□□□□ 0.91
HIST1H2AJQ99878 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
HIST1H2AJQ99878 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HIST1H2AJQ99878 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HIST1H2AJQ99878 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
HIST1H2AJQ99878 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC20.71■□□□□ 0.91
HIST1H2AJQ99878 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC20.71■□□□□ 0.91
HIST1H2AJQ99878 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC20.71■□□□□ 0.91
HIST1H2AJQ99878 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
HIST1H2AJQ99878 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.71■□□□□ 0.91
HIST1H2AJQ99878 AC007375.3-201ENST00000600936 2314 ntBASIC20.71■□□□□ 0.91
HIST1H2AJQ99878 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
HIST1H2AJQ99878 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
HIST1H2AJQ99878 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.7■□□□□ 0.9
HIST1H2AJQ99878 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HIST1H2AJQ99878 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
HIST1H2AJQ99878 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC20.7■□□□□ 0.9
HIST1H2AJQ99878 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
HIST1H2AJQ99878 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
HIST1H2AJQ99878 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
HIST1H2AJQ99878 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
HIST1H2AJQ99878 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
HIST1H2AJQ99878 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.7■□□□□ 0.9
HIST1H2AJQ99878 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.7■□□□□ 0.9
HIST1H2AJQ99878 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.7■□□□□ 0.9
HIST1H2AJQ99878 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
HIST1H2AJQ99878 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
HIST1H2AJQ99878 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HIST1H2AJQ99878 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
HIST1H2AJQ99878 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HIST1H2AJQ99878 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.69■□□□□ 0.9
HIST1H2AJQ99878 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
HIST1H2AJQ99878 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
HIST1H2AJQ99878 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HIST1H2AJQ99878 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HIST1H2AJQ99878 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.69■□□□□ 0.9
HIST1H2AJQ99878 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HIST1H2AJQ99878 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HIST1H2AJQ99878 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.69■□□□□ 0.9
HIST1H2AJQ99878 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.69■□□□□ 0.9
HIST1H2AJQ99878 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HIST1H2AJQ99878 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
HIST1H2AJQ99878 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
HIST1H2AJQ99878 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.69■□□□□ 0.9
HIST1H2AJQ99878 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC20.69■□□□□ 0.9
HIST1H2AJQ99878 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.68■□□□□ 0.9
HIST1H2AJQ99878 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HIST1H2AJQ99878 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.68■□□□□ 0.9
HIST1H2AJQ99878 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
HIST1H2AJQ99878 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HIST1H2AJQ99878 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.68■□□□□ 0.9
HIST1H2AJQ99878 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HIST1H2AJQ99878 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.68■□□□□ 0.9
HIST1H2AJQ99878 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.68■□□□□ 0.9
HIST1H2AJQ99878 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.68■□□□□ 0.9
HIST1H2AJQ99878 MIR6084-201ENST00000622012 110 ntBASIC20.68■□□□□ 0.9
HIST1H2AJQ99878 AC026310.3-201ENST00000625186 2373 ntBASIC20.68■□□□□ 0.9
HIST1H2AJQ99878 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
HIST1H2AJQ99878 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
HIST1H2AJQ99878 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HIST1H2AJQ99878 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.68■□□□□ 0.9
HIST1H2AJQ99878 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.68■□□□□ 0.9
HIST1H2AJQ99878 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HIST1H2AJQ99878 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HIST1H2AJQ99878 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HIST1H2AJQ99878 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HIST1H2AJQ99878 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HIST1H2AJQ99878 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HIST1H2AJQ99878 AK1-201ENST00000223836 736 ntTSL 3 BASIC20.67■□□□□ 0.9
HIST1H2AJQ99878 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
HIST1H2AJQ99878 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.67■□□□□ 0.9
HIST1H2AJQ99878 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC20.67■□□□□ 0.9
HIST1H2AJQ99878 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HIST1H2AJQ99878 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
HIST1H2AJQ99878 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HIST1H2AJQ99878 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
HIST1H2AJQ99878 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HIST1H2AJQ99878 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HIST1H2AJQ99878 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC20.66■□□□□ 0.9
HIST1H2AJQ99878 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HIST1H2AJQ99878 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HIST1H2AJQ99878 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.66■□□□□ 0.9
HIST1H2AJQ99878 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HIST1H2AJQ99878 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
HIST1H2AJQ99878 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
HIST1H2AJQ99878 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HIST1H2AJQ99878 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HIST1H2AJQ99878 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms