Protein–RNA interactions for Protein: Q96RT7

TUBGCP6, Gamma-tubulin complex component 6, humanhuman

Predictions only

Length 1,819 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP6Q96RT7 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
TUBGCP6Q96RT7 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
TUBGCP6Q96RT7 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC27.38■■□□□ 1.97
TUBGCP6Q96RT7 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
TUBGCP6Q96RT7 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC27.38■■□□□ 1.97
TUBGCP6Q96RT7 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC27.38■■□□□ 1.97
TUBGCP6Q96RT7 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC27.37■■□□□ 1.97
TUBGCP6Q96RT7 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC27.37■■□□□ 1.97
TUBGCP6Q96RT7 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC27.37■■□□□ 1.97
TUBGCP6Q96RT7 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC27.37■■□□□ 1.97
TUBGCP6Q96RT7 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
TUBGCP6Q96RT7 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC27.37■■□□□ 1.97
TUBGCP6Q96RT7 AC008403.3-201ENST00000598924 454 ntBASIC27.37■■□□□ 1.97
TUBGCP6Q96RT7 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
TUBGCP6Q96RT7 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC27.37■■□□□ 1.97
TUBGCP6Q96RT7 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC27.37■■□□□ 1.97
TUBGCP6Q96RT7 MME-217ENST00000616757 1315 ntTSL 5 BASIC27.37■■□□□ 1.97
TUBGCP6Q96RT7 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
TUBGCP6Q96RT7 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC27.37■■□□□ 1.97
TUBGCP6Q96RT7 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC27.37■■□□□ 1.97
TUBGCP6Q96RT7 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC27.37■■□□□ 1.97
TUBGCP6Q96RT7 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC27.37■■□□□ 1.97
TUBGCP6Q96RT7 AC073648.6-201ENST00000641589 218 ntBASIC27.37■■□□□ 1.97
TUBGCP6Q96RT7 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
TUBGCP6Q96RT7 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC27.36■■□□□ 1.97
TUBGCP6Q96RT7 AC010980.2-201ENST00000587099 1412 ntBASIC27.36■■□□□ 1.97
TUBGCP6Q96RT7 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC27.36■■□□□ 1.97
TUBGCP6Q96RT7 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC27.36■■□□□ 1.97
TUBGCP6Q96RT7 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC27.36■■□□□ 1.97
TUBGCP6Q96RT7 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
TUBGCP6Q96RT7 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
TUBGCP6Q96RT7 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC27.36■■□□□ 1.97
TUBGCP6Q96RT7 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC27.36■■□□□ 1.97
TUBGCP6Q96RT7 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC27.36■■□□□ 1.97
TUBGCP6Q96RT7 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC27.35■■□□□ 1.97
TUBGCP6Q96RT7 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
TUBGCP6Q96RT7 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC27.35■■□□□ 1.97
TUBGCP6Q96RT7 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC27.35■■□□□ 1.97
TUBGCP6Q96RT7 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC27.35■■□□□ 1.97
TUBGCP6Q96RT7 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC27.35■■□□□ 1.97
TUBGCP6Q96RT7 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC27.35■■□□□ 1.97
TUBGCP6Q96RT7 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
TUBGCP6Q96RT7 FXN-202ENST00000396364 980 ntTSL 5 BASIC27.35■■□□□ 1.97
TUBGCP6Q96RT7 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
TUBGCP6Q96RT7 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC27.35■■□□□ 1.97
TUBGCP6Q96RT7 MAX-217ENST00000557277 728 ntTSL 3 BASIC27.35■■□□□ 1.97
TUBGCP6Q96RT7 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
TUBGCP6Q96RT7 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
TUBGCP6Q96RT7 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
TUBGCP6Q96RT7 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC27.34■■□□□ 1.97
TUBGCP6Q96RT7 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
TUBGCP6Q96RT7 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
TUBGCP6Q96RT7 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC27.34■■□□□ 1.97
TUBGCP6Q96RT7 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC27.34■■□□□ 1.97
TUBGCP6Q96RT7 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
TUBGCP6Q96RT7 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC27.34■■□□□ 1.97
TUBGCP6Q96RT7 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC27.34■■□□□ 1.97
TUBGCP6Q96RT7 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
TUBGCP6Q96RT7 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC27.34■■□□□ 1.97
TUBGCP6Q96RT7 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC27.33■■□□□ 1.97
TUBGCP6Q96RT7 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC27.33■■□□□ 1.97
TUBGCP6Q96RT7 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC27.33■■□□□ 1.97
TUBGCP6Q96RT7 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC27.33■■□□□ 1.97
TUBGCP6Q96RT7 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC27.33■■□□□ 1.97
TUBGCP6Q96RT7 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
TUBGCP6Q96RT7 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
TUBGCP6Q96RT7 ECEL1P3-201ENST00000427961 737 ntBASIC27.33■■□□□ 1.97
TUBGCP6Q96RT7 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC27.33■■□□□ 1.97
TUBGCP6Q96RT7 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC27.33■■□□□ 1.97
TUBGCP6Q96RT7 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC27.33■■□□□ 1.97
TUBGCP6Q96RT7 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC27.33■■□□□ 1.97
TUBGCP6Q96RT7 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC27.33■■□□□ 1.96
TUBGCP6Q96RT7 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC27.32■■□□□ 1.96
TUBGCP6Q96RT7 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
TUBGCP6Q96RT7 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
TUBGCP6Q96RT7 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
TUBGCP6Q96RT7 PEX7-202ENST00000367756 680 ntTSL 3 BASIC27.32■■□□□ 1.96
TUBGCP6Q96RT7 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
TUBGCP6Q96RT7 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC27.32■■□□□ 1.96
TUBGCP6Q96RT7 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC27.32■■□□□ 1.96
TUBGCP6Q96RT7 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
TUBGCP6Q96RT7 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC27.32■■□□□ 1.96
TUBGCP6Q96RT7 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
TUBGCP6Q96RT7 GCA-201ENST00000233612 1694 ntTSL 2 BASIC27.31■■□□□ 1.96
TUBGCP6Q96RT7 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC27.31■■□□□ 1.96
TUBGCP6Q96RT7 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC27.31■■□□□ 1.96
TUBGCP6Q96RT7 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
TUBGCP6Q96RT7 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC27.31■■□□□ 1.96
TUBGCP6Q96RT7 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC27.31■■□□□ 1.96
TUBGCP6Q96RT7 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC27.31■■□□□ 1.96
TUBGCP6Q96RT7 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
TUBGCP6Q96RT7 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
TUBGCP6Q96RT7 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC27.31■■□□□ 1.96
TUBGCP6Q96RT7 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC27.3■■□□□ 1.96
TUBGCP6Q96RT7 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC27.3■■□□□ 1.96
TUBGCP6Q96RT7 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
TUBGCP6Q96RT7 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
TUBGCP6Q96RT7 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC27.3■■□□□ 1.96
TUBGCP6Q96RT7 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
TUBGCP6Q96RT7 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC27.3■■□□□ 1.96
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms