Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
COL21A1Q96P44 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC19.92■□□□□ 0.78
COL21A1Q96P44 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC19.92■□□□□ 0.78
COL21A1Q96P44 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC19.92■□□□□ 0.78
COL21A1Q96P44 AC005229.4-201ENST00000610085 2198 ntBASIC19.92■□□□□ 0.78
COL21A1Q96P44 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL21A1Q96P44 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
COL21A1Q96P44 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL21A1Q96P44 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL21A1Q96P44 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL21A1Q96P44 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL21A1Q96P44 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
COL21A1Q96P44 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL21A1Q96P44 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL21A1Q96P44 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.91■□□□□ 0.78
COL21A1Q96P44 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
COL21A1Q96P44 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC19.91■□□□□ 0.78
COL21A1Q96P44 SMUG1P1-201ENST00000590640 811 ntBASIC19.91■□□□□ 0.78
COL21A1Q96P44 NME4-211ENST00000620944 1193 ntTSL 2 BASIC19.91■□□□□ 0.78
COL21A1Q96P44 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC19.91■□□□□ 0.78
COL21A1Q96P44 AL358852.1-201ENST00000623174 1268 ntBASIC19.91■□□□□ 0.78
COL21A1Q96P44 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL21A1Q96P44 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
COL21A1Q96P44 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL21A1Q96P44 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL21A1Q96P44 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL21A1Q96P44 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL21A1Q96P44 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
COL21A1Q96P44 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL21A1Q96P44 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL21A1Q96P44 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
COL21A1Q96P44 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
COL21A1Q96P44 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC19.91■□□□□ 0.78
COL21A1Q96P44 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
COL21A1Q96P44 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
COL21A1Q96P44 AC073130.3-201ENST00000624389 2278 ntBASIC19.9■□□□□ 0.78
COL21A1Q96P44 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL21A1Q96P44 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC19.9■□□□□ 0.78
COL21A1Q96P44 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL21A1Q96P44 MFF-208ENST00000409616 1247 ntTSL 5 BASIC19.9■□□□□ 0.78
COL21A1Q96P44 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL21A1Q96P44 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC19.9■□□□□ 0.78
COL21A1Q96P44 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC19.9■□□□□ 0.78
COL21A1Q96P44 AL354811.1-201ENST00000610286 706 ntBASIC19.9■□□□□ 0.78
COL21A1Q96P44 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
COL21A1Q96P44 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.9■□□□□ 0.78
COL21A1Q96P44 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC19.9■□□□□ 0.78
COL21A1Q96P44 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.9■□□□□ 0.78
COL21A1Q96P44 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL21A1Q96P44 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
COL21A1Q96P44 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL21A1Q96P44 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
COL21A1Q96P44 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
COL21A1Q96P44 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
COL21A1Q96P44 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
COL21A1Q96P44 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
COL21A1Q96P44 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
COL21A1Q96P44 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.89■□□□□ 0.77
COL21A1Q96P44 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC19.89■□□□□ 0.77
COL21A1Q96P44 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.89■□□□□ 0.77
COL21A1Q96P44 LGR4-203ENST00000480977 492 ntTSL 2 BASIC19.89■□□□□ 0.77
COL21A1Q96P44 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.89■□□□□ 0.77
COL21A1Q96P44 AC012414.1-201ENST00000556676 535 ntBASIC19.89■□□□□ 0.77
COL21A1Q96P44 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
COL21A1Q96P44 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.89■□□□□ 0.77
COL21A1Q96P44 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.89■□□□□ 0.77
COL21A1Q96P44 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
COL21A1Q96P44 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.88■□□□□ 0.77
COL21A1Q96P44 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.88■□□□□ 0.77
COL21A1Q96P44 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL21A1Q96P44 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.88■□□□□ 0.77
COL21A1Q96P44 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL21A1Q96P44 MPST-204ENST00000404393 1329 ntTSL 5 BASIC19.88■□□□□ 0.77
COL21A1Q96P44 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL21A1Q96P44 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL21A1Q96P44 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
COL21A1Q96P44 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC19.88■□□□□ 0.77
COL21A1Q96P44 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
COL21A1Q96P44 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
COL21A1Q96P44 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC19.88■□□□□ 0.77
COL21A1Q96P44 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC19.88■□□□□ 0.77
COL21A1Q96P44 AC104564.3-201ENST00000582367 638 ntBASIC19.88■□□□□ 0.77
COL21A1Q96P44 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC19.88■□□□□ 0.77
COL21A1Q96P44 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL21A1Q96P44 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL21A1Q96P44 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
COL21A1Q96P44 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL21A1Q96P44 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL21A1Q96P44 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.88■□□□□ 0.77
COL21A1Q96P44 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL21A1Q96P44 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL21A1Q96P44 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.87■□□□□ 0.77
COL21A1Q96P44 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL21A1Q96P44 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.87■□□□□ 0.77
COL21A1Q96P44 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL21A1Q96P44 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL21A1Q96P44 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL21A1Q96P44 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC19.87■□□□□ 0.77
COL21A1Q96P44 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC19.87■□□□□ 0.77
COL21A1Q96P44 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms