Protein–RNA interactions for Protein: Q96LM1

LINC00615, Putative uncharacterized protein encoded by LINC00615, humanhuman

Predicted RBP Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00615Q96LM1 AC145350.3-201ENST00000569033 163 ntBASIC20.7■□□□□ 0.9
LINC00615Q96LM1 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
LINC00615Q96LM1 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.7■□□□□ 0.9
LINC00615Q96LM1 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.7■□□□□ 0.9
LINC00615Q96LM1 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
LINC00615Q96LM1 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.7■□□□□ 0.9
LINC00615Q96LM1 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.7■□□□□ 0.9
LINC00615Q96LM1 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
LINC00615Q96LM1 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
LINC00615Q96LM1 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
LINC00615Q96LM1 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LINC00615Q96LM1 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LINC00615Q96LM1 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LINC00615Q96LM1 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.69■□□□□ 0.9
LINC00615Q96LM1 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LINC00615Q96LM1 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LINC00615Q96LM1 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LINC00615Q96LM1 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
LINC00615Q96LM1 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
LINC00615Q96LM1 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.69■□□□□ 0.9
LINC00615Q96LM1 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LINC00615Q96LM1 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.69■□□□□ 0.9
LINC00615Q96LM1 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.69■□□□□ 0.9
LINC00615Q96LM1 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
LINC00615Q96LM1 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
LINC00615Q96LM1 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
LINC00615Q96LM1 SLC7A5P1-201ENST00000568957 537 ntBASIC20.69■□□□□ 0.9
LINC00615Q96LM1 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
LINC00615Q96LM1 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC20.69■□□□□ 0.9
LINC00615Q96LM1 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
LINC00615Q96LM1 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
LINC00615Q96LM1 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LINC00615Q96LM1 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.68■□□□□ 0.9
LINC00615Q96LM1 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LINC00615Q96LM1 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
LINC00615Q96LM1 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
LINC00615Q96LM1 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
LINC00615Q96LM1 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC20.68■□□□□ 0.9
LINC00615Q96LM1 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC20.68■□□□□ 0.9
LINC00615Q96LM1 AC092437.1-201ENST00000624794 1048 ntBASIC20.68■□□□□ 0.9
LINC00615Q96LM1 WWOX-218ENST00000627394 894 ntTSL 5 BASIC20.68■□□□□ 0.9
LINC00615Q96LM1 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
LINC00615Q96LM1 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LINC00615Q96LM1 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.68■□□□□ 0.9
LINC00615Q96LM1 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
LINC00615Q96LM1 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
LINC00615Q96LM1 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LINC00615Q96LM1 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.68■□□□□ 0.9
LINC00615Q96LM1 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LINC00615Q96LM1 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
LINC00615Q96LM1 FBXW4P1-201ENST00000426721 2239 ntBASIC20.68■□□□□ 0.9
LINC00615Q96LM1 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LINC00615Q96LM1 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
LINC00615Q96LM1 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LINC00615Q96LM1 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LINC00615Q96LM1 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LINC00615Q96LM1 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LINC00615Q96LM1 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LINC00615Q96LM1 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC20.67■□□□□ 0.9
LINC00615Q96LM1 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20.67■□□□□ 0.9
LINC00615Q96LM1 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LINC00615Q96LM1 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LINC00615Q96LM1 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
LINC00615Q96LM1 KRT16P2-201ENST00000414673 1423 ntBASIC20.67■□□□□ 0.9
LINC00615Q96LM1 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.67■□□□□ 0.9
LINC00615Q96LM1 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
LINC00615Q96LM1 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LINC00615Q96LM1 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LINC00615Q96LM1 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LINC00615Q96LM1 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LINC00615Q96LM1 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.67■□□□□ 0.9
LINC00615Q96LM1 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.66■□□□□ 0.9
LINC00615Q96LM1 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
LINC00615Q96LM1 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
LINC00615Q96LM1 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LINC00615Q96LM1 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
LINC00615Q96LM1 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC20.66■□□□□ 0.9
LINC00615Q96LM1 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC20.66■□□□□ 0.9
LINC00615Q96LM1 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20.66■□□□□ 0.9
LINC00615Q96LM1 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LINC00615Q96LM1 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
LINC00615Q96LM1 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LINC00615Q96LM1 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
LINC00615Q96LM1 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.66■□□□□ 0.9
LINC00615Q96LM1 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
LINC00615Q96LM1 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
LINC00615Q96LM1 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
LINC00615Q96LM1 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.65■□□□□ 0.9
LINC00615Q96LM1 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
LINC00615Q96LM1 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LINC00615Q96LM1 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
LINC00615Q96LM1 AC061975.6-201ENST00000579045 1553 ntBASIC20.65■□□□□ 0.9
LINC00615Q96LM1 GAS2L1P2-201ENST00000436355 1356 ntBASIC20.65■□□□□ 0.9
LINC00615Q96LM1 AC016769.1-201ENST00000409132 1010 ntBASIC20.65■□□□□ 0.9
LINC00615Q96LM1 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.65■□□□□ 0.9
LINC00615Q96LM1 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC20.65■□□□□ 0.9
LINC00615Q96LM1 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC20.65■□□□□ 0.9
LINC00615Q96LM1 AC120498.10-201ENST00000621827 505 ntBASIC20.65■□□□□ 0.9
LINC00615Q96LM1 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LINC00615Q96LM1 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms