Protein–RNA interactions for Protein: Q96J02

ITCH, E3 ubiquitin-protein ligase Itchy homolog, humanhuman

Predictions only

Length 903 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITCHQ96J02 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ITCHQ96J02 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.09■□□□□ 0.81
ITCHQ96J02 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
ITCHQ96J02 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ITCHQ96J02 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ITCHQ96J02 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
ITCHQ96J02 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
ITCHQ96J02 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.08■□□□□ 0.81
ITCHQ96J02 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
ITCHQ96J02 AL356441.2-201ENST00000443009 864 ntBASIC20.08■□□□□ 0.81
ITCHQ96J02 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC20.08■□□□□ 0.81
ITCHQ96J02 MIR4466-201ENST00000606121 54 ntBASIC20.08■□□□□ 0.81
ITCHQ96J02 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
ITCHQ96J02 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
ITCHQ96J02 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.8
ITCHQ96J02 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
ITCHQ96J02 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.07■□□□□ 0.8
ITCHQ96J02 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ITCHQ96J02 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ITCHQ96J02 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
ITCHQ96J02 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ITCHQ96J02 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.07■□□□□ 0.8
ITCHQ96J02 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC20.07■□□□□ 0.8
ITCHQ96J02 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.07■□□□□ 0.8
ITCHQ96J02 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.07■□□□□ 0.8
ITCHQ96J02 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ITCHQ96J02 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
ITCHQ96J02 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
ITCHQ96J02 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ITCHQ96J02 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ITCHQ96J02 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.07■□□□□ 0.8
ITCHQ96J02 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
ITCHQ96J02 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
ITCHQ96J02 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.06■□□□□ 0.8
ITCHQ96J02 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
ITCHQ96J02 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ITCHQ96J02 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ITCHQ96J02 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
ITCHQ96J02 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ITCHQ96J02 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
ITCHQ96J02 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC20.06■□□□□ 0.8
ITCHQ96J02 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ITCHQ96J02 AL157384.1-201ENST00000445995 2473 ntBASIC20.06■□□□□ 0.8
ITCHQ96J02 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ITCHQ96J02 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ITCHQ96J02 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ITCHQ96J02 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.06■□□□□ 0.8
ITCHQ96J02 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.06■□□□□ 0.8
ITCHQ96J02 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.06■□□□□ 0.8
ITCHQ96J02 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.06■□□□□ 0.8
ITCHQ96J02 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
ITCHQ96J02 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ITCHQ96J02 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
ITCHQ96J02 AP006587.3-201ENST00000525742 1516 ntBASIC20.06■□□□□ 0.8
ITCHQ96J02 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
ITCHQ96J02 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.05■□□□□ 0.8
ITCHQ96J02 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ITCHQ96J02 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ITCHQ96J02 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
ITCHQ96J02 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.05■□□□□ 0.8
ITCHQ96J02 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ITCHQ96J02 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.05■□□□□ 0.8
ITCHQ96J02 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
ITCHQ96J02 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ITCHQ96J02 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
ITCHQ96J02 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ITCHQ96J02 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ITCHQ96J02 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC20.05■□□□□ 0.8
ITCHQ96J02 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.05■□□□□ 0.8
ITCHQ96J02 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.05■□□□□ 0.8
ITCHQ96J02 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
ITCHQ96J02 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
ITCHQ96J02 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
ITCHQ96J02 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC20.04■□□□□ 0.8
ITCHQ96J02 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.04■□□□□ 0.8
ITCHQ96J02 LINC01521-201ENST00000504184 1943 ntBASIC20.04■□□□□ 0.8
ITCHQ96J02 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ITCHQ96J02 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ITCHQ96J02 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
ITCHQ96J02 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ITCHQ96J02 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
ITCHQ96J02 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
ITCHQ96J02 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
ITCHQ96J02 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.04■□□□□ 0.8
ITCHQ96J02 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.04■□□□□ 0.8
ITCHQ96J02 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
ITCHQ96J02 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ITCHQ96J02 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ITCHQ96J02 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
ITCHQ96J02 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
ITCHQ96J02 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.03■□□□□ 0.8
ITCHQ96J02 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ITCHQ96J02 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ITCHQ96J02 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
ITCHQ96J02 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.03■□□□□ 0.8
ITCHQ96J02 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC20.03■□□□□ 0.8
ITCHQ96J02 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
ITCHQ96J02 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
ITCHQ96J02 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.03■□□□□ 0.8
ITCHQ96J02 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms