Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
LRCH3Q96II8 RPS2P55-201ENST00000397318 883 ntBASIC23.05■■□□□ 1.28
LRCH3Q96II8 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
LRCH3Q96II8 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
LRCH3Q96II8 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC23.05■■□□□ 1.28
LRCH3Q96II8 AC107956.1-201ENST00000494359 873 ntBASIC23.05■■□□□ 1.28
LRCH3Q96II8 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC23.05■■□□□ 1.28
LRCH3Q96II8 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC23.05■■□□□ 1.28
LRCH3Q96II8 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
LRCH3Q96II8 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
LRCH3Q96II8 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
LRCH3Q96II8 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
LRCH3Q96II8 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC23.05■■□□□ 1.28
LRCH3Q96II8 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
LRCH3Q96II8 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC23.04■■□□□ 1.28
LRCH3Q96II8 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC23.04■■□□□ 1.28
LRCH3Q96II8 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC23.04■■□□□ 1.28
LRCH3Q96II8 LSM12P1-201ENST00000411836 588 ntBASIC23.04■■□□□ 1.28
LRCH3Q96II8 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC23.04■■□□□ 1.28
LRCH3Q96II8 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC23.04■■□□□ 1.28
LRCH3Q96II8 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC23.04■■□□□ 1.28
LRCH3Q96II8 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC23.04■■□□□ 1.28
LRCH3Q96II8 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC23.04■■□□□ 1.28
LRCH3Q96II8 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
LRCH3Q96II8 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
LRCH3Q96II8 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
LRCH3Q96II8 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
LRCH3Q96II8 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
LRCH3Q96II8 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
LRCH3Q96II8 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC23.03■■□□□ 1.28
LRCH3Q96II8 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC23.03■■□□□ 1.28
LRCH3Q96II8 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC23.03■■□□□ 1.28
LRCH3Q96II8 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
LRCH3Q96II8 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC23.03■■□□□ 1.28
LRCH3Q96II8 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC23.03■■□□□ 1.28
LRCH3Q96II8 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC23.03■■□□□ 1.28
LRCH3Q96II8 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC23.03■■□□□ 1.28
LRCH3Q96II8 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
LRCH3Q96II8 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
LRCH3Q96II8 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
LRCH3Q96II8 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
LRCH3Q96II8 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
LRCH3Q96II8 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
LRCH3Q96II8 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
LRCH3Q96II8 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
LRCH3Q96II8 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
LRCH3Q96II8 RNF146-204ENST00000476956 884 ntTSL 2 BASIC23.02■■□□□ 1.28
LRCH3Q96II8 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC23.02■■□□□ 1.28
LRCH3Q96II8 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
LRCH3Q96II8 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.28
LRCH3Q96II8 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.28
LRCH3Q96II8 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC23.02■■□□□ 1.28
LRCH3Q96II8 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
LRCH3Q96II8 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
LRCH3Q96II8 LTK-203ENST00000453182 2412 ntTSL 2 BASIC23.01■■□□□ 1.27
LRCH3Q96II8 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC23.01■■□□□ 1.27
LRCH3Q96II8 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
LRCH3Q96II8 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
LRCH3Q96II8 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
LRCH3Q96II8 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
LRCH3Q96II8 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
LRCH3Q96II8 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
LRCH3Q96II8 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC23.01■■□□□ 1.27
LRCH3Q96II8 RMI2-205ENST00000576027 818 ntTSL 2 BASIC23.01■■□□□ 1.27
LRCH3Q96II8 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC23.01■■□□□ 1.27
LRCH3Q96II8 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC23■■□□□ 1.27
LRCH3Q96II8 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
LRCH3Q96II8 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
LRCH3Q96II8 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC23■■□□□ 1.27
LRCH3Q96II8 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC23■■□□□ 1.27
LRCH3Q96II8 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
LRCH3Q96II8 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC23■■□□□ 1.27
LRCH3Q96II8 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC23■■□□□ 1.27
LRCH3Q96II8 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC23■■□□□ 1.27
LRCH3Q96II8 DHDH-203ENST00000522614 776 ntTSL 5 BASIC23■■□□□ 1.27
LRCH3Q96II8 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC23■■□□□ 1.27
LRCH3Q96II8 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
LRCH3Q96II8 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC23■■□□□ 1.27
LRCH3Q96II8 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
LRCH3Q96II8 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC23■■□□□ 1.27
LRCH3Q96II8 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC23■■□□□ 1.27
LRCH3Q96II8 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC22.99■■□□□ 1.27
LRCH3Q96II8 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
LRCH3Q96II8 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
LRCH3Q96II8 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
LRCH3Q96II8 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC22.99■■□□□ 1.27
LRCH3Q96II8 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC22.99■■□□□ 1.27
LRCH3Q96II8 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
LRCH3Q96II8 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
LRCH3Q96II8 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC22.99■■□□□ 1.27
LRCH3Q96II8 HLA-B-256ENST00000639848 1089 ntBASIC22.99■■□□□ 1.27
LRCH3Q96II8 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
LRCH3Q96II8 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
LRCH3Q96II8 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC22.99■■□□□ 1.27
LRCH3Q96II8 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC22.98■■□□□ 1.27
LRCH3Q96II8 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
LRCH3Q96II8 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
LRCH3Q96II8 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
LRCH3Q96II8 NME6-213ENST00000451657 871 ntTSL 2 BASIC22.98■■□□□ 1.27
LRCH3Q96II8 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC22.98■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms