Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SIPA1Q96FS4 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SIPA1Q96FS4 PHB2-213ENST00000546111 858 ntTSL 2 BASIC21.24■□□□□ 0.99
SIPA1Q96FS4 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC21.24■□□□□ 0.99
SIPA1Q96FS4 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
SIPA1Q96FS4 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
SIPA1Q96FS4 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
SIPA1Q96FS4 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC21.24■□□□□ 0.99
SIPA1Q96FS4 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC21.23■□□□□ 0.99
SIPA1Q96FS4 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SIPA1Q96FS4 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SIPA1Q96FS4 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
SIPA1Q96FS4 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC21.23■□□□□ 0.99
SIPA1Q96FS4 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC21.23■□□□□ 0.99
SIPA1Q96FS4 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC21.23■□□□□ 0.99
SIPA1Q96FS4 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SIPA1Q96FS4 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
SIPA1Q96FS4 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SIPA1Q96FS4 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
SIPA1Q96FS4 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SIPA1Q96FS4 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
SIPA1Q96FS4 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
SIPA1Q96FS4 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC21.23■□□□□ 0.99
SIPA1Q96FS4 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SIPA1Q96FS4 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC21.22■□□□□ 0.99
SIPA1Q96FS4 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC21.22■□□□□ 0.99
SIPA1Q96FS4 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SIPA1Q96FS4 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC21.22■□□□□ 0.99
SIPA1Q96FS4 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SIPA1Q96FS4 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SIPA1Q96FS4 AL512625.2-201ENST00000417533 625 ntBASIC21.22■□□□□ 0.99
SIPA1Q96FS4 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC21.22■□□□□ 0.99
SIPA1Q96FS4 AC016405.3-201ENST00000607710 860 ntBASIC21.22■□□□□ 0.99
SIPA1Q96FS4 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC21.22■□□□□ 0.99
SIPA1Q96FS4 MARS-234ENST00000630571 216 ntTSL 5 BASIC21.22■□□□□ 0.99
SIPA1Q96FS4 MARS-235ENST00000630803 183 ntTSL 3 BASIC21.22■□□□□ 0.99
SIPA1Q96FS4 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
SIPA1Q96FS4 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
SIPA1Q96FS4 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SIPA1Q96FS4 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SIPA1Q96FS4 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
SIPA1Q96FS4 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SIPA1Q96FS4 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
SIPA1Q96FS4 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SIPA1Q96FS4 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SIPA1Q96FS4 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SIPA1Q96FS4 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC21.21■□□□□ 0.99
SIPA1Q96FS4 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC21.21■□□□□ 0.99
SIPA1Q96FS4 AC093787.1-201ENST00000450396 207 ntBASIC21.21■□□□□ 0.99
SIPA1Q96FS4 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC21.21■□□□□ 0.99
SIPA1Q96FS4 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SIPA1Q96FS4 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC21.21■□□□□ 0.99
SIPA1Q96FS4 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC21.21■□□□□ 0.99
SIPA1Q96FS4 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
SIPA1Q96FS4 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC21.2■□□□□ 0.98
SIPA1Q96FS4 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SIPA1Q96FS4 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
SIPA1Q96FS4 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
SIPA1Q96FS4 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SIPA1Q96FS4 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SIPA1Q96FS4 MIR4651-201ENST00000582622 73 ntBASIC21.2■□□□□ 0.98
SIPA1Q96FS4 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC21.2■□□□□ 0.98
SIPA1Q96FS4 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
SIPA1Q96FS4 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SIPA1Q96FS4 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SIPA1Q96FS4 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
SIPA1Q96FS4 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SIPA1Q96FS4 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC21.2■□□□□ 0.98
SIPA1Q96FS4 AC003102.1-202ENST00000563394 1796 ntBASIC21.2■□□□□ 0.98
SIPA1Q96FS4 RBM17P2-201ENST00000616397 1405 ntBASIC21.2■□□□□ 0.98
SIPA1Q96FS4 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SIPA1Q96FS4 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SIPA1Q96FS4 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SIPA1Q96FS4 AC061975.6-201ENST00000579045 1553 ntBASIC21.19■□□□□ 0.98
SIPA1Q96FS4 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SIPA1Q96FS4 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC21.19■□□□□ 0.98
SIPA1Q96FS4 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC21.19■□□□□ 0.98
SIPA1Q96FS4 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
SIPA1Q96FS4 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC21.19■□□□□ 0.98
SIPA1Q96FS4 PPP1R14BP2-201ENST00000426284 444 ntBASIC21.19■□□□□ 0.98
SIPA1Q96FS4 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC21.19■□□□□ 0.98
SIPA1Q96FS4 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC21.19■□□□□ 0.98
SIPA1Q96FS4 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC21.19■□□□□ 0.98
SIPA1Q96FS4 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
SIPA1Q96FS4 AL591742.1-201ENST00000604433 565 ntBASIC21.19■□□□□ 0.98
SIPA1Q96FS4 FGF8-207ENST00000618991 856 ntTSL 3 BASIC21.19■□□□□ 0.98
SIPA1Q96FS4 TBCB-214ENST00000629269 413 ntTSL 5 BASIC21.19■□□□□ 0.98
SIPA1Q96FS4 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
SIPA1Q96FS4 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
SIPA1Q96FS4 AC092053.2-201ENST00000640557 1818 ntBASIC21.19■□□□□ 0.98
SIPA1Q96FS4 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SIPA1Q96FS4 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SIPA1Q96FS4 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SIPA1Q96FS4 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SIPA1Q96FS4 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SIPA1Q96FS4 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SIPA1Q96FS4 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
SIPA1Q96FS4 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
SIPA1Q96FS4 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC21.18■□□□□ 0.98
SIPA1Q96FS4 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC21.18■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms