Protein–RNA interactions for Protein: Q96CX6

LRRC58, Leucine-rich repeat-containing protein 58, humanhuman

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC58Q96CX6 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LRRC58Q96CX6 AP004607.7-201ENST00000527152 1677 ntBASIC20.09■□□□□ 0.81
LRRC58Q96CX6 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
LRRC58Q96CX6 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LRRC58Q96CX6 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.09■□□□□ 0.81
LRRC58Q96CX6 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LRRC58Q96CX6 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
LRRC58Q96CX6 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
LRRC58Q96CX6 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
LRRC58Q96CX6 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.08■□□□□ 0.81
LRRC58Q96CX6 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
LRRC58Q96CX6 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
LRRC58Q96CX6 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.08■□□□□ 0.81
LRRC58Q96CX6 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC20.08■□□□□ 0.81
LRRC58Q96CX6 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
LRRC58Q96CX6 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
LRRC58Q96CX6 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.07■□□□□ 0.8
LRRC58Q96CX6 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LRRC58Q96CX6 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.07■□□□□ 0.8
LRRC58Q96CX6 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
LRRC58Q96CX6 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
LRRC58Q96CX6 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LRRC58Q96CX6 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.07■□□□□ 0.8
LRRC58Q96CX6 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
LRRC58Q96CX6 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.07■□□□□ 0.8
LRRC58Q96CX6 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
LRRC58Q96CX6 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LRRC58Q96CX6 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.07■□□□□ 0.8
LRRC58Q96CX6 AC010525.1-201ENST00000585559 441 ntBASIC20.07■□□□□ 0.8
LRRC58Q96CX6 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
LRRC58Q96CX6 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.07■□□□□ 0.8
LRRC58Q96CX6 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LRRC58Q96CX6 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LRRC58Q96CX6 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
LRRC58Q96CX6 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
LRRC58Q96CX6 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
LRRC58Q96CX6 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
LRRC58Q96CX6 GABARAPL3-202ENST00000624044 1851 ntBASIC20.07■□□□□ 0.8
LRRC58Q96CX6 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.07■□□□□ 0.8
LRRC58Q96CX6 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
LRRC58Q96CX6 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
LRRC58Q96CX6 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LRRC58Q96CX6 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
LRRC58Q96CX6 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.06■□□□□ 0.8
LRRC58Q96CX6 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LRRC58Q96CX6 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
LRRC58Q96CX6 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
LRRC58Q96CX6 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LRRC58Q96CX6 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LRRC58Q96CX6 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
LRRC58Q96CX6 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
LRRC58Q96CX6 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
LRRC58Q96CX6 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
LRRC58Q96CX6 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.06■□□□□ 0.8
LRRC58Q96CX6 CREM-229ENST00000474362 1030 ntTSL 2 BASIC20.06■□□□□ 0.8
LRRC58Q96CX6 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
LRRC58Q96CX6 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.06■□□□□ 0.8
LRRC58Q96CX6 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.06■□□□□ 0.8
LRRC58Q96CX6 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.06■□□□□ 0.8
LRRC58Q96CX6 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
LRRC58Q96CX6 AC006128.1-201ENST00000624704 1661 ntBASIC20.06■□□□□ 0.8
LRRC58Q96CX6 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.06■□□□□ 0.8
LRRC58Q96CX6 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.06■□□□□ 0.8
LRRC58Q96CX6 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LRRC58Q96CX6 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LRRC58Q96CX6 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LRRC58Q96CX6 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.05■□□□□ 0.8
LRRC58Q96CX6 AP005212.1-201ENST00000581547 1997 ntBASIC20.05■□□□□ 0.8
LRRC58Q96CX6 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LRRC58Q96CX6 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
LRRC58Q96CX6 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.05■□□□□ 0.8
LRRC58Q96CX6 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
LRRC58Q96CX6 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.05■□□□□ 0.8
LRRC58Q96CX6 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
LRRC58Q96CX6 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
LRRC58Q96CX6 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.04■□□□□ 0.8
LRRC58Q96CX6 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
LRRC58Q96CX6 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LRRC58Q96CX6 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LRRC58Q96CX6 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LRRC58Q96CX6 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LRRC58Q96CX6 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LRRC58Q96CX6 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LRRC58Q96CX6 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LRRC58Q96CX6 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
LRRC58Q96CX6 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
LRRC58Q96CX6 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.04■□□□□ 0.8
LRRC58Q96CX6 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
LRRC58Q96CX6 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.04■□□□□ 0.8
LRRC58Q96CX6 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LRRC58Q96CX6 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC20.04■□□□□ 0.8
LRRC58Q96CX6 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
LRRC58Q96CX6 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LRRC58Q96CX6 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
LRRC58Q96CX6 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC20.04■□□□□ 0.8
LRRC58Q96CX6 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LRRC58Q96CX6 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
LRRC58Q96CX6 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.03■□□□□ 0.8
LRRC58Q96CX6 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LRRC58Q96CX6 AC073314.1-201ENST00000568729 2216 ntBASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms