Protein–RNA interactions for Protein: Q96B54

ZNF428, Zinc finger protein 428, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF428Q96B54 TESC-206ENST00000541210 936 ntTSL 3 BASIC27.28■■□□□ 1.96
ZNF428Q96B54 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC27.28■■□□□ 1.96
ZNF428Q96B54 AC053503.5-201ENST00000601508 636 ntBASIC27.28■■□□□ 1.96
ZNF428Q96B54 GXYLT1P5-201ENST00000614548 1189 ntBASIC27.28■■□□□ 1.96
ZNF428Q96B54 AC073111.5-205ENST00000641717 521 ntBASIC27.28■■□□□ 1.96
ZNF428Q96B54 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
ZNF428Q96B54 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
ZNF428Q96B54 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC27.27■■□□□ 1.96
ZNF428Q96B54 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC27.27■■□□□ 1.96
ZNF428Q96B54 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC27.27■■□□□ 1.96
ZNF428Q96B54 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC27.27■■□□□ 1.96
ZNF428Q96B54 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.96
ZNF428Q96B54 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
ZNF428Q96B54 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
ZNF428Q96B54 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
ZNF428Q96B54 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
ZNF428Q96B54 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
ZNF428Q96B54 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
ZNF428Q96B54 HLA-L-209ENST00000420110 1011 ntBASIC27.26■■□□□ 1.95
ZNF428Q96B54 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
ZNF428Q96B54 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
ZNF428Q96B54 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC27.26■■□□□ 1.95
ZNF428Q96B54 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
ZNF428Q96B54 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC27.26■■□□□ 1.95
ZNF428Q96B54 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
ZNF428Q96B54 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
ZNF428Q96B54 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
ZNF428Q96B54 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
ZNF428Q96B54 KRT87P-202ENST00000534226 1464 ntBASIC27.25■■□□□ 1.95
ZNF428Q96B54 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC27.25■■□□□ 1.95
ZNF428Q96B54 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC27.25■■□□□ 1.95
ZNF428Q96B54 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC27.25■■□□□ 1.95
ZNF428Q96B54 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
ZNF428Q96B54 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
ZNF428Q96B54 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC27.25■■□□□ 1.95
ZNF428Q96B54 ID1-201ENST00000376105 1233 ntBASIC27.25■■□□□ 1.95
ZNF428Q96B54 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
ZNF428Q96B54 HSCB-202ENST00000398941 955 ntTSL 2 BASIC27.25■■□□□ 1.95
ZNF428Q96B54 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
ZNF428Q96B54 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
ZNF428Q96B54 AC104187.1-201ENST00000607510 612 ntBASIC27.25■■□□□ 1.95
ZNF428Q96B54 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC27.25■■□□□ 1.95
ZNF428Q96B54 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC27.25■■□□□ 1.95
ZNF428Q96B54 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
ZNF428Q96B54 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC27.25■■□□□ 1.95
ZNF428Q96B54 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
ZNF428Q96B54 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
ZNF428Q96B54 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
ZNF428Q96B54 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
ZNF428Q96B54 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
ZNF428Q96B54 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
ZNF428Q96B54 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC27.24■■□□□ 1.95
ZNF428Q96B54 RNF146-206ENST00000480444 843 ntTSL 2 BASIC27.24■■□□□ 1.95
ZNF428Q96B54 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC27.24■■□□□ 1.95
ZNF428Q96B54 DENND3-207ENST00000518347 850 ntTSL 2 BASIC27.24■■□□□ 1.95
ZNF428Q96B54 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC27.24■■□□□ 1.95
ZNF428Q96B54 RAP2CP1-201ENST00000605103 478 ntBASIC27.24■■□□□ 1.95
ZNF428Q96B54 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
ZNF428Q96B54 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC27.24■■□□□ 1.95
ZNF428Q96B54 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC27.24■■□□□ 1.95
ZNF428Q96B54 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
ZNF428Q96B54 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC27.24■■□□□ 1.95
ZNF428Q96B54 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC27.24■■□□□ 1.95
ZNF428Q96B54 WWC2-AS2-201ENST00000578387 2183 ntBASIC27.24■■□□□ 1.95
ZNF428Q96B54 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
ZNF428Q96B54 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
ZNF428Q96B54 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
ZNF428Q96B54 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
ZNF428Q96B54 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC27.23■■□□□ 1.95
ZNF428Q96B54 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
ZNF428Q96B54 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC27.23■■□□□ 1.95
ZNF428Q96B54 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
ZNF428Q96B54 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
ZNF428Q96B54 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
ZNF428Q96B54 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC27.23■■□□□ 1.95
ZNF428Q96B54 SPI1-203ENST00000533030 661 ntTSL 2 BASIC27.23■■□□□ 1.95
ZNF428Q96B54 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
ZNF428Q96B54 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC27.23■■□□□ 1.95
ZNF428Q96B54 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
ZNF428Q96B54 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
ZNF428Q96B54 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC27.23■■□□□ 1.95
ZNF428Q96B54 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
ZNF428Q96B54 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
ZNF428Q96B54 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
ZNF428Q96B54 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
ZNF428Q96B54 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
ZNF428Q96B54 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
ZNF428Q96B54 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC27.22■■□□□ 1.95
ZNF428Q96B54 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC27.22■■□□□ 1.95
ZNF428Q96B54 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC27.22■■□□□ 1.95
ZNF428Q96B54 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
ZNF428Q96B54 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC27.22■■□□□ 1.95
ZNF428Q96B54 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
ZNF428Q96B54 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
ZNF428Q96B54 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC27.22■■□□□ 1.95
ZNF428Q96B54 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC27.22■■□□□ 1.95
ZNF428Q96B54 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
ZNF428Q96B54 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC27.22■■□□□ 1.95
ZNF428Q96B54 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC27.22■■□□□ 1.95
ZNF428Q96B54 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC27.21■■□□□ 1.95
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms