Protein–RNA interactions for Protein: Q92738

USP6NL, USP6 N-terminal-like protein, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NLQ92738 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
USP6NLQ92738 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
USP6NLQ92738 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC24.09■■□□□ 1.45
USP6NLQ92738 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
USP6NLQ92738 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC24.09■■□□□ 1.45
USP6NLQ92738 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
USP6NLQ92738 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
USP6NLQ92738 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
USP6NLQ92738 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC24.08■■□□□ 1.45
USP6NLQ92738 AL158047.1-201ENST00000445918 881 ntBASIC24.08■■□□□ 1.45
USP6NLQ92738 AC026366.1-201ENST00000488803 879 ntBASIC24.08■■□□□ 1.45
USP6NLQ92738 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC24.08■■□□□ 1.45
USP6NLQ92738 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC24.08■■□□□ 1.45
USP6NLQ92738 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC24.08■■□□□ 1.45
USP6NLQ92738 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC24.08■■□□□ 1.45
USP6NLQ92738 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC24.08■■□□□ 1.44
USP6NLQ92738 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC24.08■■□□□ 1.44
USP6NLQ92738 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
USP6NLQ92738 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC24.08■■□□□ 1.44
USP6NLQ92738 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC24.07■■□□□ 1.44
USP6NLQ92738 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC24.07■■□□□ 1.44
USP6NLQ92738 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC24.07■■□□□ 1.44
USP6NLQ92738 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
USP6NLQ92738 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
USP6NLQ92738 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC24.07■■□□□ 1.44
USP6NLQ92738 OR2A1-AS1-201ENST00000462305 773 ntBASIC24.07■■□□□ 1.44
USP6NLQ92738 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC24.07■■□□□ 1.44
USP6NLQ92738 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC24.07■■□□□ 1.44
USP6NLQ92738 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC24.07■■□□□ 1.44
USP6NLQ92738 AC137767.1-201ENST00000602918 1920 ntBASIC24.07■■□□□ 1.44
USP6NLQ92738 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
USP6NLQ92738 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC24.06■■□□□ 1.44
USP6NLQ92738 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
USP6NLQ92738 BAALC-201ENST00000297574 801 ntTSL 3 BASIC24.06■■□□□ 1.44
USP6NLQ92738 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC24.06■■□□□ 1.44
USP6NLQ92738 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC24.06■■□□□ 1.44
USP6NLQ92738 CASP6-205ENST00000505486 538 ntTSL 4 BASIC24.06■■□□□ 1.44
USP6NLQ92738 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC24.06■■□□□ 1.44
USP6NLQ92738 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
USP6NLQ92738 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC24.06■■□□□ 1.44
USP6NLQ92738 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC24.06■■□□□ 1.44
USP6NLQ92738 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
USP6NLQ92738 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
USP6NLQ92738 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC24.06■■□□□ 1.44
USP6NLQ92738 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC24.06■■□□□ 1.44
USP6NLQ92738 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
USP6NLQ92738 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
USP6NLQ92738 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC24.06■■□□□ 1.44
USP6NLQ92738 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
USP6NLQ92738 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC24.05■■□□□ 1.44
USP6NLQ92738 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
USP6NLQ92738 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC24.05■■□□□ 1.44
USP6NLQ92738 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC24.05■■□□□ 1.44
USP6NLQ92738 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC24.05■■□□□ 1.44
USP6NLQ92738 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
USP6NLQ92738 RPS2P4-201ENST00000476944 856 ntBASIC24.05■■□□□ 1.44
USP6NLQ92738 PBX1-209ENST00000485769 834 ntTSL 2 BASIC24.05■■□□□ 1.44
USP6NLQ92738 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC24.05■■□□□ 1.44
USP6NLQ92738 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
USP6NLQ92738 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
USP6NLQ92738 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC24.05■■□□□ 1.44
USP6NLQ92738 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
USP6NLQ92738 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC24.04■■□□□ 1.44
USP6NLQ92738 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC24.04■■□□□ 1.44
USP6NLQ92738 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
USP6NLQ92738 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
USP6NLQ92738 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
USP6NLQ92738 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC24.04■■□□□ 1.44
USP6NLQ92738 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC24.04■■□□□ 1.44
USP6NLQ92738 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC24.04■■□□□ 1.44
USP6NLQ92738 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
USP6NLQ92738 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
USP6NLQ92738 AC073648.6-201ENST00000641589 218 ntBASIC24.04■■□□□ 1.44
USP6NLQ92738 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
USP6NLQ92738 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC24.04■■□□□ 1.44
USP6NLQ92738 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC24.03■■□□□ 1.44
USP6NLQ92738 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
USP6NLQ92738 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC24.03■■□□□ 1.44
USP6NLQ92738 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC24.03■■□□□ 1.44
USP6NLQ92738 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC24.03■■□□□ 1.44
USP6NLQ92738 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
USP6NLQ92738 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC24.03■■□□□ 1.44
USP6NLQ92738 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
USP6NLQ92738 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC24.03■■□□□ 1.44
USP6NLQ92738 CD44-222ENST00000526025 1052 ntTSL 2 BASIC24.03■■□□□ 1.44
USP6NLQ92738 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC24.03■■□□□ 1.44
USP6NLQ92738 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC24.03■■□□□ 1.44
USP6NLQ92738 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC24.03■■□□□ 1.44
USP6NLQ92738 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
USP6NLQ92738 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
USP6NLQ92738 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
USP6NLQ92738 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC24.02■■□□□ 1.44
USP6NLQ92738 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC24.02■■□□□ 1.44
USP6NLQ92738 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
USP6NLQ92738 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC24.02■■□□□ 1.44
USP6NLQ92738 AC061975.6-201ENST00000579045 1553 ntBASIC24.02■■□□□ 1.44
USP6NLQ92738 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC24.02■■□□□ 1.44
USP6NLQ92738 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC24.02■■□□□ 1.44
USP6NLQ92738 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC24.02■■□□□ 1.44
USP6NLQ92738 AC087742.1-201ENST00000575880 1738 ntBASIC24.01■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 11.7 ms