Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC22.58■■□□□ 1.21
DDX1Q92499 USP48-205ENST00000421625 2818 ntTSL 2 BASIC22.58■■□□□ 1.21
DDX1Q92499 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC22.58■■□□□ 1.21
DDX1Q92499 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
DDX1Q92499 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC22.58■■□□□ 1.2
DDX1Q92499 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.2
DDX1Q92499 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC22.57■■□□□ 1.2
DDX1Q92499 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
DDX1Q92499 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
DDX1Q92499 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC22.57■■□□□ 1.2
DDX1Q92499 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC22.57■■□□□ 1.2
DDX1Q92499 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
DDX1Q92499 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
DDX1Q92499 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC22.57■■□□□ 1.2
DDX1Q92499 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
DDX1Q92499 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC22.57■■□□□ 1.2
DDX1Q92499 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC22.57■■□□□ 1.2
DDX1Q92499 AL354811.1-201ENST00000610286 706 ntBASIC22.57■■□□□ 1.2
DDX1Q92499 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC22.57■■□□□ 1.2
DDX1Q92499 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
DDX1Q92499 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
DDX1Q92499 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
DDX1Q92499 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
DDX1Q92499 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
DDX1Q92499 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
DDX1Q92499 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
DDX1Q92499 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
DDX1Q92499 HACD1-201ENST00000326961 773 ntTSL 2 BASIC22.56■■□□□ 1.2
DDX1Q92499 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC22.56■■□□□ 1.2
DDX1Q92499 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC22.56■■□□□ 1.2
DDX1Q92499 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC22.56■■□□□ 1.2
DDX1Q92499 VPS53-216ENST00000574029 585 ntTSL 4 BASIC22.56■■□□□ 1.2
DDX1Q92499 AL024507.2-201ENST00000606070 2574 ntBASIC22.56■■□□□ 1.2
DDX1Q92499 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
DDX1Q92499 PALM-208ENST00000592155 2272 ntTSL 4 BASIC22.56■■□□□ 1.2
DDX1Q92499 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
DDX1Q92499 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
DDX1Q92499 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
DDX1Q92499 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
DDX1Q92499 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
DDX1Q92499 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
DDX1Q92499 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
DDX1Q92499 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
DDX1Q92499 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC22.55■■□□□ 1.2
DDX1Q92499 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
DDX1Q92499 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
DDX1Q92499 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
DDX1Q92499 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
DDX1Q92499 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
DDX1Q92499 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC22.55■■□□□ 1.2
DDX1Q92499 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC22.55■■□□□ 1.2
DDX1Q92499 AL358852.1-201ENST00000623174 1268 ntBASIC22.55■■□□□ 1.2
DDX1Q92499 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
DDX1Q92499 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
DDX1Q92499 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
DDX1Q92499 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
DDX1Q92499 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
DDX1Q92499 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC22.54■■□□□ 1.2
DDX1Q92499 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
DDX1Q92499 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC22.54■■□□□ 1.2
DDX1Q92499 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC22.54■■□□□ 1.2
DDX1Q92499 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC22.54■■□□□ 1.2
DDX1Q92499 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
DDX1Q92499 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
DDX1Q92499 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC22.54■■□□□ 1.2
DDX1Q92499 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC22.54■■□□□ 1.2
DDX1Q92499 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
DDX1Q92499 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
DDX1Q92499 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
DDX1Q92499 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC22.53■■□□□ 1.2
DDX1Q92499 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
DDX1Q92499 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC22.53■■□□□ 1.2
DDX1Q92499 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC22.53■■□□□ 1.2
DDX1Q92499 MIR6084-201ENST00000622012 110 ntBASIC22.53■■□□□ 1.2
DDX1Q92499 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC22.53■■□□□ 1.2
DDX1Q92499 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC22.53■■□□□ 1.2
DDX1Q92499 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
DDX1Q92499 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC22.52■■□□□ 1.2
DDX1Q92499 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
DDX1Q92499 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
DDX1Q92499 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
DDX1Q92499 NT5C3AP1-201ENST00000394500 1012 ntBASIC22.52■■□□□ 1.2
DDX1Q92499 HLA-L-209ENST00000420110 1011 ntBASIC22.52■■□□□ 1.2
DDX1Q92499 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
DDX1Q92499 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC22.52■■□□□ 1.2
DDX1Q92499 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
DDX1Q92499 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC22.52■■□□□ 1.2
DDX1Q92499 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
DDX1Q92499 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC22.52■■□□□ 1.2
DDX1Q92499 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.19
DDX1Q92499 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC22.52■■□□□ 1.19
DDX1Q92499 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC22.51■■□□□ 1.19
DDX1Q92499 NARF-205ENST00000412079 1760 ntTSL 5 BASIC22.51■■□□□ 1.19
DDX1Q92499 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC22.51■■□□□ 1.19
DDX1Q92499 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
DDX1Q92499 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC22.51■■□□□ 1.19
DDX1Q92499 GXYLT1P2-201ENST00000433312 1230 ntBASIC22.51■■□□□ 1.19
DDX1Q92499 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
DDX1Q92499 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC22.51■■□□□ 1.19
DDX1Q92499 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC22.51■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms