Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
ATG4AQ8WYN0 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC21.9■■□□□ 1.1
ATG4AQ8WYN0 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC21.9■■□□□ 1.1
ATG4AQ8WYN0 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
ATG4AQ8WYN0 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC21.9■■□□□ 1.1
ATG4AQ8WYN0 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
ATG4AQ8WYN0 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
ATG4AQ8WYN0 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
ATG4AQ8WYN0 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
ATG4AQ8WYN0 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
ATG4AQ8WYN0 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC21.89■■□□□ 1.1
ATG4AQ8WYN0 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.1
ATG4AQ8WYN0 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
ATG4AQ8WYN0 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC21.89■■□□□ 1.1
ATG4AQ8WYN0 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC21.89■■□□□ 1.09
ATG4AQ8WYN0 BX842568.3-201ENST00000418104 571 ntBASIC21.89■■□□□ 1.09
ATG4AQ8WYN0 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC21.89■■□□□ 1.09
ATG4AQ8WYN0 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC21.89■■□□□ 1.09
ATG4AQ8WYN0 AC133561.4-201ENST00000566112 224 ntBASIC21.89■■□□□ 1.09
ATG4AQ8WYN0 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC21.89■■□□□ 1.09
ATG4AQ8WYN0 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
ATG4AQ8WYN0 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC21.89■■□□□ 1.09
ATG4AQ8WYN0 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
ATG4AQ8WYN0 ASL-203ENST00000380839 1765 ntTSL 5 BASIC21.89■■□□□ 1.09
ATG4AQ8WYN0 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC21.89■■□□□ 1.09
ATG4AQ8WYN0 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
ATG4AQ8WYN0 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC21.89■■□□□ 1.09
ATG4AQ8WYN0 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
ATG4AQ8WYN0 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
ATG4AQ8WYN0 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC21.88■■□□□ 1.09
ATG4AQ8WYN0 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
ATG4AQ8WYN0 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
ATG4AQ8WYN0 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
ATG4AQ8WYN0 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
ATG4AQ8WYN0 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
ATG4AQ8WYN0 AC024257.2-201ENST00000549699 147 ntBASIC21.88■■□□□ 1.09
ATG4AQ8WYN0 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC21.88■■□□□ 1.09
ATG4AQ8WYN0 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
ATG4AQ8WYN0 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
ATG4AQ8WYN0 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
ATG4AQ8WYN0 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
ATG4AQ8WYN0 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
ATG4AQ8WYN0 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC21.88■■□□□ 1.09
ATG4AQ8WYN0 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
ATG4AQ8WYN0 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
ATG4AQ8WYN0 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC21.88■■□□□ 1.09
ATG4AQ8WYN0 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
ATG4AQ8WYN0 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
ATG4AQ8WYN0 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC21.87■■□□□ 1.09
ATG4AQ8WYN0 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
ATG4AQ8WYN0 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
ATG4AQ8WYN0 PARN-205ENST00000539279 1557 ntTSL 2 BASIC21.87■■□□□ 1.09
ATG4AQ8WYN0 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC21.87■■□□□ 1.09
ATG4AQ8WYN0 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
ATG4AQ8WYN0 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC21.87■■□□□ 1.09
ATG4AQ8WYN0 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
ATG4AQ8WYN0 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
ATG4AQ8WYN0 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
ATG4AQ8WYN0 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
ATG4AQ8WYN0 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC21.87■■□□□ 1.09
ATG4AQ8WYN0 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
ATG4AQ8WYN0 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC21.87■■□□□ 1.09
ATG4AQ8WYN0 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
ATG4AQ8WYN0 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
ATG4AQ8WYN0 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
ATG4AQ8WYN0 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC21.87■■□□□ 1.09
ATG4AQ8WYN0 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
ATG4AQ8WYN0 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
ATG4AQ8WYN0 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC21.87■■□□□ 1.09
ATG4AQ8WYN0 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
ATG4AQ8WYN0 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
ATG4AQ8WYN0 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
ATG4AQ8WYN0 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC21.86■■□□□ 1.09
ATG4AQ8WYN0 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
ATG4AQ8WYN0 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
ATG4AQ8WYN0 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
ATG4AQ8WYN0 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
ATG4AQ8WYN0 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
ATG4AQ8WYN0 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
ATG4AQ8WYN0 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
ATG4AQ8WYN0 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
ATG4AQ8WYN0 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC21.86■■□□□ 1.09
ATG4AQ8WYN0 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC21.86■■□□□ 1.09
ATG4AQ8WYN0 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
ATG4AQ8WYN0 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
ATG4AQ8WYN0 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
ATG4AQ8WYN0 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC21.85■■□□□ 1.09
ATG4AQ8WYN0 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC21.85■■□□□ 1.09
ATG4AQ8WYN0 AC233992.3-201ENST00000607491 485 ntBASIC21.85■■□□□ 1.09
ATG4AQ8WYN0 AL136162.1-201ENST00000607711 1078 ntBASIC21.85■■□□□ 1.09
ATG4AQ8WYN0 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
ATG4AQ8WYN0 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
ATG4AQ8WYN0 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
ATG4AQ8WYN0 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
ATG4AQ8WYN0 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC21.85■■□□□ 1.09
ATG4AQ8WYN0 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
ATG4AQ8WYN0 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
ATG4AQ8WYN0 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
ATG4AQ8WYN0 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC21.84■■□□□ 1.09
ATG4AQ8WYN0 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms