Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CKAP2Q8WWK9 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CKAP2Q8WWK9 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CKAP2Q8WWK9 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC21.02■□□□□ 0.96
CKAP2Q8WWK9 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CKAP2Q8WWK9 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC21.02■□□□□ 0.96
CKAP2Q8WWK9 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC21.02■□□□□ 0.96
CKAP2Q8WWK9 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
CKAP2Q8WWK9 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CKAP2Q8WWK9 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
CKAP2Q8WWK9 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
CKAP2Q8WWK9 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
CKAP2Q8WWK9 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
CKAP2Q8WWK9 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
CKAP2Q8WWK9 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CKAP2Q8WWK9 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC21.01■□□□□ 0.95
CKAP2Q8WWK9 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
CKAP2Q8WWK9 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC21.01■□□□□ 0.95
CKAP2Q8WWK9 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CKAP2Q8WWK9 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC21.01■□□□□ 0.95
CKAP2Q8WWK9 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
CKAP2Q8WWK9 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CKAP2Q8WWK9 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CKAP2Q8WWK9 PALM-207ENST00000590161 2137 ntTSL 4 BASIC21.01■□□□□ 0.95
CKAP2Q8WWK9 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CKAP2Q8WWK9 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CKAP2Q8WWK9 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC21■□□□□ 0.95
CKAP2Q8WWK9 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CKAP2Q8WWK9 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CKAP2Q8WWK9 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC21■□□□□ 0.95
CKAP2Q8WWK9 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC21■□□□□ 0.95
CKAP2Q8WWK9 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CKAP2Q8WWK9 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CKAP2Q8WWK9 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CKAP2Q8WWK9 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC21■□□□□ 0.95
CKAP2Q8WWK9 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC21■□□□□ 0.95
CKAP2Q8WWK9 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC21■□□□□ 0.95
CKAP2Q8WWK9 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC21■□□□□ 0.95
CKAP2Q8WWK9 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CKAP2Q8WWK9 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CKAP2Q8WWK9 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CKAP2Q8WWK9 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CKAP2Q8WWK9 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC21■□□□□ 0.95
CKAP2Q8WWK9 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
CKAP2Q8WWK9 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
CKAP2Q8WWK9 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
CKAP2Q8WWK9 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CKAP2Q8WWK9 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.99■□□□□ 0.95
CKAP2Q8WWK9 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CKAP2Q8WWK9 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CKAP2Q8WWK9 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CKAP2Q8WWK9 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC20.99■□□□□ 0.95
CKAP2Q8WWK9 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.99■□□□□ 0.95
CKAP2Q8WWK9 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
CKAP2Q8WWK9 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CKAP2Q8WWK9 AC004987.1-201ENST00000428627 508 ntBASIC20.99■□□□□ 0.95
CKAP2Q8WWK9 ATP5G2P3-201ENST00000429083 425 ntBASIC20.99■□□□□ 0.95
CKAP2Q8WWK9 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC20.99■□□□□ 0.95
CKAP2Q8WWK9 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
CKAP2Q8WWK9 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CKAP2Q8WWK9 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CKAP2Q8WWK9 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.99■□□□□ 0.95
CKAP2Q8WWK9 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.99■□□□□ 0.95
CKAP2Q8WWK9 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CKAP2Q8WWK9 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CKAP2Q8WWK9 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CKAP2Q8WWK9 AC027702.1-201ENST00000563810 1770 ntBASIC20.98■□□□□ 0.95
CKAP2Q8WWK9 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC20.98■□□□□ 0.95
CKAP2Q8WWK9 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.98■□□□□ 0.95
CKAP2Q8WWK9 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.98■□□□□ 0.95
CKAP2Q8WWK9 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CKAP2Q8WWK9 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC20.98■□□□□ 0.95
CKAP2Q8WWK9 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CKAP2Q8WWK9 AC003102.1-202ENST00000563394 1796 ntBASIC20.97■□□□□ 0.95
CKAP2Q8WWK9 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CKAP2Q8WWK9 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CKAP2Q8WWK9 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CKAP2Q8WWK9 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.97■□□□□ 0.95
CKAP2Q8WWK9 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.97■□□□□ 0.95
CKAP2Q8WWK9 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CKAP2Q8WWK9 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CKAP2Q8WWK9 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CKAP2Q8WWK9 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.97■□□□□ 0.95
CKAP2Q8WWK9 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
CKAP2Q8WWK9 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CKAP2Q8WWK9 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CKAP2Q8WWK9 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
CKAP2Q8WWK9 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CKAP2Q8WWK9 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CKAP2Q8WWK9 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CKAP2Q8WWK9 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.96■□□□□ 0.95
CKAP2Q8WWK9 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CKAP2Q8WWK9 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CKAP2Q8WWK9 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
CKAP2Q8WWK9 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CKAP2Q8WWK9 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.96■□□□□ 0.95
CKAP2Q8WWK9 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CKAP2Q8WWK9 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.96■□□□□ 0.95
CKAP2Q8WWK9 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CKAP2Q8WWK9 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms