Protein–RNA interactions for Protein: Q8TEC5

SH3RF2, Putative E3 ubiquitin-protein ligase SH3RF2, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF2Q8TEC5 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SH3RF2Q8TEC5 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SH3RF2Q8TEC5 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC22■■□□□ 1.11
SH3RF2Q8TEC5 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC22■■□□□ 1.11
SH3RF2Q8TEC5 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC22■■□□□ 1.11
SH3RF2Q8TEC5 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
SH3RF2Q8TEC5 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
SH3RF2Q8TEC5 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
SH3RF2Q8TEC5 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SH3RF2Q8TEC5 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
SH3RF2Q8TEC5 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC21.99■■□□□ 1.11
SH3RF2Q8TEC5 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SH3RF2Q8TEC5 BMP1-204ENST00000397814 836 ntTSL 4 BASIC21.99■■□□□ 1.11
SH3RF2Q8TEC5 METTL15-202ENST00000403099 795 ntTSL 5 BASIC21.99■■□□□ 1.11
SH3RF2Q8TEC5 RNF146-206ENST00000480444 843 ntTSL 2 BASIC21.99■■□□□ 1.11
SH3RF2Q8TEC5 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC21.99■■□□□ 1.11
SH3RF2Q8TEC5 OAS3-207ENST00000551007 998 ntTSL 2 BASIC21.99■■□□□ 1.11
SH3RF2Q8TEC5 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC21.99■■□□□ 1.11
SH3RF2Q8TEC5 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC21.99■■□□□ 1.11
SH3RF2Q8TEC5 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
SH3RF2Q8TEC5 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
SH3RF2Q8TEC5 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SH3RF2Q8TEC5 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
SH3RF2Q8TEC5 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
SH3RF2Q8TEC5 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC21.99■■□□□ 1.11
SH3RF2Q8TEC5 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC21.99■■□□□ 1.11
SH3RF2Q8TEC5 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
SH3RF2Q8TEC5 UQCRFS1P1-201ENST00000435169 820 ntBASIC21.98■■□□□ 1.11
SH3RF2Q8TEC5 GUSBP6-202ENST00000438529 1198 ntBASIC21.98■■□□□ 1.11
SH3RF2Q8TEC5 TERF1P5-201ENST00000477545 1207 ntBASIC21.98■■□□□ 1.11
SH3RF2Q8TEC5 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
SH3RF2Q8TEC5 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SH3RF2Q8TEC5 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
SH3RF2Q8TEC5 AL117328.2-201ENST00000624617 1940 ntBASIC21.98■■□□□ 1.11
SH3RF2Q8TEC5 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
SH3RF2Q8TEC5 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
SH3RF2Q8TEC5 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SH3RF2Q8TEC5 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SH3RF2Q8TEC5 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SH3RF2Q8TEC5 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
SH3RF2Q8TEC5 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC21.97■■□□□ 1.11
SH3RF2Q8TEC5 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC21.97■■□□□ 1.11
SH3RF2Q8TEC5 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
SH3RF2Q8TEC5 AC142086.2-201ENST00000569753 217 ntBASIC21.97■■□□□ 1.11
SH3RF2Q8TEC5 AC008175.2-201ENST00000612840 297 ntBASIC21.97■■□□□ 1.11
SH3RF2Q8TEC5 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC21.97■■□□□ 1.11
SH3RF2Q8TEC5 AC013268.1-206ENST00000638368 961 ntBASIC21.97■■□□□ 1.11
SH3RF2Q8TEC5 AC112229.1-201ENST00000639295 961 ntBASIC21.97■■□□□ 1.11
SH3RF2Q8TEC5 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
SH3RF2Q8TEC5 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
SH3RF2Q8TEC5 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
SH3RF2Q8TEC5 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC21.97■■□□□ 1.11
SH3RF2Q8TEC5 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC21.97■■□□□ 1.11
SH3RF2Q8TEC5 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC21.97■■□□□ 1.11
SH3RF2Q8TEC5 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SH3RF2Q8TEC5 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.96■■□□□ 1.11
SH3RF2Q8TEC5 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
SH3RF2Q8TEC5 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
SH3RF2Q8TEC5 STK25-234ENST00000535007 2459 ntTSL 2 BASIC21.96■■□□□ 1.11
SH3RF2Q8TEC5 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC21.96■■□□□ 1.11
SH3RF2Q8TEC5 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
SH3RF2Q8TEC5 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC21.96■■□□□ 1.11
SH3RF2Q8TEC5 APTR-203ENST00000430801 583 ntTSL 5 BASIC21.96■■□□□ 1.11
SH3RF2Q8TEC5 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC21.96■■□□□ 1.11
SH3RF2Q8TEC5 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
SH3RF2Q8TEC5 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.96■■□□□ 1.11
SH3RF2Q8TEC5 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
SH3RF2Q8TEC5 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
SH3RF2Q8TEC5 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
SH3RF2Q8TEC5 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC21.95■■□□□ 1.1
SH3RF2Q8TEC5 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
SH3RF2Q8TEC5 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC21.95■■□□□ 1.1
SH3RF2Q8TEC5 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
SH3RF2Q8TEC5 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.1
SH3RF2Q8TEC5 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC21.95■■□□□ 1.1
SH3RF2Q8TEC5 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC21.95■■□□□ 1.1
SH3RF2Q8TEC5 AC120498.10-201ENST00000621827 505 ntBASIC21.95■■□□□ 1.1
SH3RF2Q8TEC5 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SH3RF2Q8TEC5 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC21.95■■□□□ 1.1
SH3RF2Q8TEC5 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SH3RF2Q8TEC5 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SH3RF2Q8TEC5 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SH3RF2Q8TEC5 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SH3RF2Q8TEC5 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC21.94■■□□□ 1.1
SH3RF2Q8TEC5 SLC29A4P1-201ENST00000398760 971 ntBASIC21.94■■□□□ 1.1
SH3RF2Q8TEC5 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
SH3RF2Q8TEC5 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC21.94■■□□□ 1.1
SH3RF2Q8TEC5 AF201337.1-201ENST00000520239 748 ntBASIC21.94■■□□□ 1.1
SH3RF2Q8TEC5 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC21.94■■□□□ 1.1
SH3RF2Q8TEC5 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC21.94■■□□□ 1.1
SH3RF2Q8TEC5 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
SH3RF2Q8TEC5 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
SH3RF2Q8TEC5 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SH3RF2Q8TEC5 GUSBP5-202ENST00000510805 1989 ntBASIC21.94■■□□□ 1.1
SH3RF2Q8TEC5 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SH3RF2Q8TEC5 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SH3RF2Q8TEC5 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC21.93■■□□□ 1.1
SH3RF2Q8TEC5 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
SH3RF2Q8TEC5 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
SH3RF2Q8TEC5 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms