Protein–RNA interactions for Protein: Q8TCU5

GRIN3A, Glutamate receptor ionotropic, NMDA 3A, humanhuman

Predictions only

Length 1,115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3AQ8TCU5 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
GRIN3AQ8TCU5 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC21.53■■□□□ 1.04
GRIN3AQ8TCU5 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
GRIN3AQ8TCU5 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
GRIN3AQ8TCU5 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.53■■□□□ 1.04
GRIN3AQ8TCU5 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
GRIN3AQ8TCU5 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
GRIN3AQ8TCU5 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
GRIN3AQ8TCU5 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
GRIN3AQ8TCU5 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC21.53■■□□□ 1.04
GRIN3AQ8TCU5 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
GRIN3AQ8TCU5 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC21.53■■□□□ 1.04
GRIN3AQ8TCU5 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC21.53■■□□□ 1.04
GRIN3AQ8TCU5 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC21.53■■□□□ 1.04
GRIN3AQ8TCU5 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.53■■□□□ 1.04
GRIN3AQ8TCU5 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC21.53■■□□□ 1.04
GRIN3AQ8TCU5 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
GRIN3AQ8TCU5 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
GRIN3AQ8TCU5 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
GRIN3AQ8TCU5 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC21.53■■□□□ 1.04
GRIN3AQ8TCU5 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
GRIN3AQ8TCU5 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
GRIN3AQ8TCU5 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
GRIN3AQ8TCU5 AC007375.3-201ENST00000600936 2314 ntBASIC21.52■■□□□ 1.04
GRIN3AQ8TCU5 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
GRIN3AQ8TCU5 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC21.52■■□□□ 1.04
GRIN3AQ8TCU5 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.52■■□□□ 1.04
GRIN3AQ8TCU5 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
GRIN3AQ8TCU5 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC21.52■■□□□ 1.04
GRIN3AQ8TCU5 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC21.52■■□□□ 1.04
GRIN3AQ8TCU5 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
GRIN3AQ8TCU5 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC21.52■■□□□ 1.04
GRIN3AQ8TCU5 VPS53-216ENST00000574029 585 ntTSL 4 BASIC21.52■■□□□ 1.04
GRIN3AQ8TCU5 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
GRIN3AQ8TCU5 AC092053.2-201ENST00000640557 1818 ntBASIC21.52■■□□□ 1.04
GRIN3AQ8TCU5 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC21.52■■□□□ 1.04
GRIN3AQ8TCU5 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC21.52■■□□□ 1.04
GRIN3AQ8TCU5 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
GRIN3AQ8TCU5 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC21.52■■□□□ 1.03
GRIN3AQ8TCU5 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
GRIN3AQ8TCU5 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
GRIN3AQ8TCU5 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
GRIN3AQ8TCU5 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
GRIN3AQ8TCU5 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC21.51■■□□□ 1.03
GRIN3AQ8TCU5 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
GRIN3AQ8TCU5 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
GRIN3AQ8TCU5 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
GRIN3AQ8TCU5 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
GRIN3AQ8TCU5 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
GRIN3AQ8TCU5 SPI1-203ENST00000533030 661 ntTSL 2 BASIC21.51■■□□□ 1.03
GRIN3AQ8TCU5 AP001160.3-201ENST00000601484 763 ntBASIC21.51■■□□□ 1.03
GRIN3AQ8TCU5 WWOX-218ENST00000627394 894 ntTSL 5 BASIC21.51■■□□□ 1.03
GRIN3AQ8TCU5 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC21.51■■□□□ 1.03
GRIN3AQ8TCU5 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC21.51■■□□□ 1.03
GRIN3AQ8TCU5 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC21.51■■□□□ 1.03
GRIN3AQ8TCU5 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC21.5■■□□□ 1.03
GRIN3AQ8TCU5 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
GRIN3AQ8TCU5 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
GRIN3AQ8TCU5 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
GRIN3AQ8TCU5 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
GRIN3AQ8TCU5 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
GRIN3AQ8TCU5 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
GRIN3AQ8TCU5 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC21.5■■□□□ 1.03
GRIN3AQ8TCU5 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
GRIN3AQ8TCU5 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
GRIN3AQ8TCU5 BID-214ENST00000617586 542 ntTSL 5 BASIC21.5■■□□□ 1.03
GRIN3AQ8TCU5 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
GRIN3AQ8TCU5 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
GRIN3AQ8TCU5 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
GRIN3AQ8TCU5 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
GRIN3AQ8TCU5 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
GRIN3AQ8TCU5 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
GRIN3AQ8TCU5 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
GRIN3AQ8TCU5 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
GRIN3AQ8TCU5 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
GRIN3AQ8TCU5 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
GRIN3AQ8TCU5 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
GRIN3AQ8TCU5 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
GRIN3AQ8TCU5 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
GRIN3AQ8TCU5 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
GRIN3AQ8TCU5 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC21.49■■□□□ 1.03
GRIN3AQ8TCU5 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC21.49■■□□□ 1.03
GRIN3AQ8TCU5 AC080038.1-201ENST00000611274 1154 ntBASIC21.49■■□□□ 1.03
GRIN3AQ8TCU5 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
GRIN3AQ8TCU5 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
GRIN3AQ8TCU5 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC21.49■■□□□ 1.03
GRIN3AQ8TCU5 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
GRIN3AQ8TCU5 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
GRIN3AQ8TCU5 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC21.48■■□□□ 1.03
GRIN3AQ8TCU5 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
GRIN3AQ8TCU5 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
GRIN3AQ8TCU5 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
GRIN3AQ8TCU5 UBE2DNL-204ENST00000602536 740 ntBASIC21.48■■□□□ 1.03
GRIN3AQ8TCU5 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
GRIN3AQ8TCU5 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
GRIN3AQ8TCU5 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
GRIN3AQ8TCU5 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC21.48■■□□□ 1.03
GRIN3AQ8TCU5 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC21.48■■□□□ 1.03
GRIN3AQ8TCU5 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
GRIN3AQ8TCU5 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms