Protein–RNA interactions for Protein: Q8N7R7

CCNYL1, Cyclin-Y-like protein 1, humanhuman

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL1Q8N7R7 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCNYL1Q8N7R7 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
CCNYL1Q8N7R7 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CCNYL1Q8N7R7 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCNYL1Q8N7R7 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.81■□□□□ 0.92
CCNYL1Q8N7R7 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCNYL1Q8N7R7 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.81■□□□□ 0.92
CCNYL1Q8N7R7 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.81■□□□□ 0.92
CCNYL1Q8N7R7 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
CCNYL1Q8N7R7 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.81■□□□□ 0.92
CCNYL1Q8N7R7 MIR4466-201ENST00000606121 54 ntBASIC20.81■□□□□ 0.92
CCNYL1Q8N7R7 AL138724.1-201ENST00000606771 1088 ntBASIC20.81■□□□□ 0.92
CCNYL1Q8N7R7 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
CCNYL1Q8N7R7 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCNYL1Q8N7R7 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCNYL1Q8N7R7 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCNYL1Q8N7R7 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
CCNYL1Q8N7R7 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CCNYL1Q8N7R7 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CCNYL1Q8N7R7 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC20.8■□□□□ 0.92
CCNYL1Q8N7R7 SLC47A1P1-202ENST00000449666 945 ntBASIC20.8■□□□□ 0.92
CCNYL1Q8N7R7 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.8■□□□□ 0.92
CCNYL1Q8N7R7 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.8■□□□□ 0.92
CCNYL1Q8N7R7 DUX4L19-201ENST00000557448 1267 ntBASIC20.8■□□□□ 0.92
CCNYL1Q8N7R7 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.8■□□□□ 0.92
CCNYL1Q8N7R7 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.8■□□□□ 0.92
CCNYL1Q8N7R7 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.8■□□□□ 0.92
CCNYL1Q8N7R7 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCNYL1Q8N7R7 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CCNYL1Q8N7R7 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
CCNYL1Q8N7R7 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC20.8■□□□□ 0.92
CCNYL1Q8N7R7 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCNYL1Q8N7R7 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CCNYL1Q8N7R7 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCNYL1Q8N7R7 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
CCNYL1Q8N7R7 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.79■□□□□ 0.92
CCNYL1Q8N7R7 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.79■□□□□ 0.92
CCNYL1Q8N7R7 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CCNYL1Q8N7R7 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.79■□□□□ 0.92
CCNYL1Q8N7R7 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CCNYL1Q8N7R7 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CCNYL1Q8N7R7 AC136469.2-201ENST00000623944 1028 ntBASIC20.79■□□□□ 0.92
CCNYL1Q8N7R7 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.79■□□□□ 0.92
CCNYL1Q8N7R7 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
CCNYL1Q8N7R7 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCNYL1Q8N7R7 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCNYL1Q8N7R7 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCNYL1Q8N7R7 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.78■□□□□ 0.92
CCNYL1Q8N7R7 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.78■□□□□ 0.92
CCNYL1Q8N7R7 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCNYL1Q8N7R7 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.78■□□□□ 0.92
CCNYL1Q8N7R7 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.78■□□□□ 0.92
CCNYL1Q8N7R7 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCNYL1Q8N7R7 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CCNYL1Q8N7R7 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CCNYL1Q8N7R7 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.78■□□□□ 0.92
CCNYL1Q8N7R7 AP005435.1-201ENST00000529293 1178 ntBASIC20.78■□□□□ 0.92
CCNYL1Q8N7R7 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.78■□□□□ 0.92
CCNYL1Q8N7R7 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
CCNYL1Q8N7R7 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.78■□□□□ 0.92
CCNYL1Q8N7R7 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.78■□□□□ 0.92
CCNYL1Q8N7R7 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCNYL1Q8N7R7 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCNYL1Q8N7R7 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCNYL1Q8N7R7 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCNYL1Q8N7R7 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.77■□□□□ 0.92
CCNYL1Q8N7R7 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CCNYL1Q8N7R7 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCNYL1Q8N7R7 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC20.77■□□□□ 0.92
CCNYL1Q8N7R7 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CCNYL1Q8N7R7 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.77■□□□□ 0.92
CCNYL1Q8N7R7 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CCNYL1Q8N7R7 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
CCNYL1Q8N7R7 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CCNYL1Q8N7R7 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CCNYL1Q8N7R7 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.91
CCNYL1Q8N7R7 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCNYL1Q8N7R7 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCNYL1Q8N7R7 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.76■□□□□ 0.91
CCNYL1Q8N7R7 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCNYL1Q8N7R7 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCNYL1Q8N7R7 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCNYL1Q8N7R7 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCNYL1Q8N7R7 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCNYL1Q8N7R7 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC20.76■□□□□ 0.91
CCNYL1Q8N7R7 AC011298.3-201ENST00000615796 283 ntBASIC20.76■□□□□ 0.91
CCNYL1Q8N7R7 AL049796.1-201ENST00000565336 1766 ntBASIC20.76■□□□□ 0.91
CCNYL1Q8N7R7 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCNYL1Q8N7R7 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCNYL1Q8N7R7 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.76■□□□□ 0.91
CCNYL1Q8N7R7 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.76■□□□□ 0.91
CCNYL1Q8N7R7 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
CCNYL1Q8N7R7 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.76■□□□□ 0.91
CCNYL1Q8N7R7 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCNYL1Q8N7R7 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCNYL1Q8N7R7 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CCNYL1Q8N7R7 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCNYL1Q8N7R7 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.75■□□□□ 0.91
CCNYL1Q8N7R7 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCNYL1Q8N7R7 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms