Protein–RNA interactions for Protein: Q8N684

CPSF7, Cleavage and polyadenylation specificity factor subunit 7, humanhuman

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7Q8N684 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CPSF7Q8N684 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CPSF7Q8N684 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
CPSF7Q8N684 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
CPSF7Q8N684 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
CPSF7Q8N684 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
CPSF7Q8N684 AC006455.2-201ENST00000429931 906 ntBASIC20.61■□□□□ 0.89
CPSF7Q8N684 AP001330.3-201ENST00000520123 633 ntBASIC20.61■□□□□ 0.89
CPSF7Q8N684 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.61■□□□□ 0.89
CPSF7Q8N684 AC241377.3-202ENST00000626088 1088 ntBASIC20.61■□□□□ 0.89
CPSF7Q8N684 AC241585.3-202ENST00000628937 1088 ntBASIC20.61■□□□□ 0.89
CPSF7Q8N684 AC245100.8-202ENST00000629247 1058 ntBASIC20.61■□□□□ 0.89
CPSF7Q8N684 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.61■□□□□ 0.89
CPSF7Q8N684 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CPSF7Q8N684 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
CPSF7Q8N684 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CPSF7Q8N684 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CPSF7Q8N684 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CPSF7Q8N684 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CPSF7Q8N684 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.6■□□□□ 0.89
CPSF7Q8N684 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CPSF7Q8N684 AL049796.1-201ENST00000565336 1766 ntBASIC20.6■□□□□ 0.89
CPSF7Q8N684 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CPSF7Q8N684 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CPSF7Q8N684 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CPSF7Q8N684 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC20.6■□□□□ 0.89
CPSF7Q8N684 MIR939-201ENST00000401314 82 ntBASIC20.6■□□□□ 0.89
CPSF7Q8N684 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC20.6■□□□□ 0.89
CPSF7Q8N684 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CPSF7Q8N684 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.6■□□□□ 0.89
CPSF7Q8N684 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.6■□□□□ 0.89
CPSF7Q8N684 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CPSF7Q8N684 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.6■□□□□ 0.89
CPSF7Q8N684 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CPSF7Q8N684 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.6■□□□□ 0.89
CPSF7Q8N684 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CPSF7Q8N684 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CPSF7Q8N684 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CPSF7Q8N684 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.59■□□□□ 0.89
CPSF7Q8N684 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CPSF7Q8N684 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.59■□□□□ 0.89
CPSF7Q8N684 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CPSF7Q8N684 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
CPSF7Q8N684 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CPSF7Q8N684 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.59■□□□□ 0.89
CPSF7Q8N684 AC105265.2-201ENST00000467189 838 ntBASIC20.59■□□□□ 0.89
CPSF7Q8N684 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CPSF7Q8N684 AC011298.3-201ENST00000615796 283 ntBASIC20.59■□□□□ 0.89
CPSF7Q8N684 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
CPSF7Q8N684 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
CPSF7Q8N684 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CPSF7Q8N684 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CPSF7Q8N684 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.59■□□□□ 0.89
CPSF7Q8N684 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
CPSF7Q8N684 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CPSF7Q8N684 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
CPSF7Q8N684 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CPSF7Q8N684 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
CPSF7Q8N684 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CPSF7Q8N684 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CPSF7Q8N684 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CPSF7Q8N684 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CPSF7Q8N684 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CPSF7Q8N684 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
CPSF7Q8N684 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.58■□□□□ 0.89
CPSF7Q8N684 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.58■□□□□ 0.89
CPSF7Q8N684 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.58■□□□□ 0.89
CPSF7Q8N684 AL138724.1-201ENST00000606771 1088 ntBASIC20.58■□□□□ 0.89
CPSF7Q8N684 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC20.58■□□□□ 0.89
CPSF7Q8N684 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.58■□□□□ 0.89
CPSF7Q8N684 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CPSF7Q8N684 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.58■□□□□ 0.88
CPSF7Q8N684 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.88
CPSF7Q8N684 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.88
CPSF7Q8N684 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CPSF7Q8N684 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CPSF7Q8N684 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
CPSF7Q8N684 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
CPSF7Q8N684 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CPSF7Q8N684 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CPSF7Q8N684 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CPSF7Q8N684 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
CPSF7Q8N684 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CPSF7Q8N684 LGR4-203ENST00000480977 492 ntTSL 2 BASIC20.57■□□□□ 0.88
CPSF7Q8N684 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.57■□□□□ 0.88
CPSF7Q8N684 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.57■□□□□ 0.88
CPSF7Q8N684 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.57■□□□□ 0.88
CPSF7Q8N684 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CPSF7Q8N684 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
CPSF7Q8N684 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.57■□□□□ 0.88
CPSF7Q8N684 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.56■□□□□ 0.88
CPSF7Q8N684 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
CPSF7Q8N684 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CPSF7Q8N684 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CPSF7Q8N684 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.56■□□□□ 0.88
CPSF7Q8N684 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.56■□□□□ 0.88
CPSF7Q8N684 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.56■□□□□ 0.88
CPSF7Q8N684 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CPSF7Q8N684 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CPSF7Q8N684 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms