Protein–RNA interactions for Protein: Q8N1N0

CLEC4F, C-type lectin domain family 4 member F, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLEC4FQ8N1N0 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLEC4FQ8N1N0 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
CLEC4FQ8N1N0 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLEC4FQ8N1N0 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20.2■□□□□ 0.82
CLEC4FQ8N1N0 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLEC4FQ8N1N0 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC20.2■□□□□ 0.82
CLEC4FQ8N1N0 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.2■□□□□ 0.82
CLEC4FQ8N1N0 AC136469.2-201ENST00000623944 1028 ntBASIC20.2■□□□□ 0.82
CLEC4FQ8N1N0 AC068587.7-201ENST00000641602 218 ntBASIC20.2■□□□□ 0.82
CLEC4FQ8N1N0 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLEC4FQ8N1N0 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.2■□□□□ 0.82
CLEC4FQ8N1N0 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLEC4FQ8N1N0 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CLEC4FQ8N1N0 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLEC4FQ8N1N0 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
CLEC4FQ8N1N0 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLEC4FQ8N1N0 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.2■□□□□ 0.82
CLEC4FQ8N1N0 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLEC4FQ8N1N0 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CLEC4FQ8N1N0 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.19■□□□□ 0.82
CLEC4FQ8N1N0 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CLEC4FQ8N1N0 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLEC4FQ8N1N0 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLEC4FQ8N1N0 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.19■□□□□ 0.82
CLEC4FQ8N1N0 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLEC4FQ8N1N0 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.19■□□□□ 0.82
CLEC4FQ8N1N0 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CLEC4FQ8N1N0 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
CLEC4FQ8N1N0 AL136116.3-201ENST00000402907 1138 ntBASIC20.19■□□□□ 0.82
CLEC4FQ8N1N0 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CLEC4FQ8N1N0 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.19■□□□□ 0.82
CLEC4FQ8N1N0 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLEC4FQ8N1N0 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLEC4FQ8N1N0 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.19■□□□□ 0.82
CLEC4FQ8N1N0 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
CLEC4FQ8N1N0 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLEC4FQ8N1N0 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLEC4FQ8N1N0 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CLEC4FQ8N1N0 AC087239.1-201ENST00000622671 572 ntBASIC20.18■□□□□ 0.82
CLEC4FQ8N1N0 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.18■□□□□ 0.82
CLEC4FQ8N1N0 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CLEC4FQ8N1N0 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CLEC4FQ8N1N0 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CLEC4FQ8N1N0 AL121603.2-201ENST00000557373 2117 ntBASIC20.18■□□□□ 0.82
CLEC4FQ8N1N0 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.18■□□□□ 0.82
CLEC4FQ8N1N0 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
CLEC4FQ8N1N0 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLEC4FQ8N1N0 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CLEC4FQ8N1N0 OXCT2P1-201ENST00000447263 1535 ntBASIC20.17■□□□□ 0.82
CLEC4FQ8N1N0 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
CLEC4FQ8N1N0 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
CLEC4FQ8N1N0 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CLEC4FQ8N1N0 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
CLEC4FQ8N1N0 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLEC4FQ8N1N0 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLEC4FQ8N1N0 DUX4L19-201ENST00000557448 1267 ntBASIC20.17■□□□□ 0.82
CLEC4FQ8N1N0 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
CLEC4FQ8N1N0 AL138724.1-201ENST00000606771 1088 ntBASIC20.17■□□□□ 0.82
CLEC4FQ8N1N0 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLEC4FQ8N1N0 AL157384.1-201ENST00000445995 2473 ntBASIC20.17■□□□□ 0.82
CLEC4FQ8N1N0 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.17■□□□□ 0.82
CLEC4FQ8N1N0 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.17■□□□□ 0.82
CLEC4FQ8N1N0 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLEC4FQ8N1N0 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.16■□□□□ 0.82
CLEC4FQ8N1N0 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLEC4FQ8N1N0 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
CLEC4FQ8N1N0 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.16■□□□□ 0.82
CLEC4FQ8N1N0 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLEC4FQ8N1N0 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CLEC4FQ8N1N0 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLEC4FQ8N1N0 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC20.16■□□□□ 0.82
CLEC4FQ8N1N0 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.16■□□□□ 0.82
CLEC4FQ8N1N0 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.16■□□□□ 0.82
CLEC4FQ8N1N0 AC011298.3-201ENST00000615796 283 ntBASIC20.16■□□□□ 0.82
CLEC4FQ8N1N0 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
CLEC4FQ8N1N0 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.16■□□□□ 0.82
CLEC4FQ8N1N0 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLEC4FQ8N1N0 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
CLEC4FQ8N1N0 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLEC4FQ8N1N0 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.16■□□□□ 0.82
CLEC4FQ8N1N0 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CLEC4FQ8N1N0 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLEC4FQ8N1N0 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.16■□□□□ 0.82
CLEC4FQ8N1N0 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
CLEC4FQ8N1N0 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
CLEC4FQ8N1N0 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
CLEC4FQ8N1N0 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.15■□□□□ 0.82
CLEC4FQ8N1N0 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.15■□□□□ 0.82
CLEC4FQ8N1N0 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC20.15■□□□□ 0.82
CLEC4FQ8N1N0 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC20.15■□□□□ 0.82
CLEC4FQ8N1N0 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.15■□□□□ 0.82
CLEC4FQ8N1N0 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.15■□□□□ 0.82
CLEC4FQ8N1N0 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CLEC4FQ8N1N0 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
CLEC4FQ8N1N0 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.15■□□□□ 0.82
CLEC4FQ8N1N0 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.15■□□□□ 0.82
CLEC4FQ8N1N0 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CLEC4FQ8N1N0 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CLEC4FQ8N1N0 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
CLEC4FQ8N1N0 AC092667.1-201ENST00000434301 2586 ntBASIC20.14■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms