Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 ABCB10P4-201ENST00000566803 2184 ntBASIC21.7■■□□□ 1.06
SIX5Q8N196 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
SIX5Q8N196 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SIX5Q8N196 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SIX5Q8N196 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC21.7■■□□□ 1.06
SIX5Q8N196 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
SIX5Q8N196 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC21.7■■□□□ 1.06
SIX5Q8N196 AL162412.1-201ENST00000567129 965 ntBASIC21.7■■□□□ 1.06
SIX5Q8N196 AL359736.2-201ENST00000621992 437 ntBASIC21.7■■□□□ 1.06
SIX5Q8N196 LINC01960-201ENST00000563759 1884 ntBASIC21.7■■□□□ 1.06
SIX5Q8N196 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SIX5Q8N196 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SIX5Q8N196 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SIX5Q8N196 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SIX5Q8N196 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SIX5Q8N196 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC21.69■■□□□ 1.06
SIX5Q8N196 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SIX5Q8N196 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC21.69■■□□□ 1.06
SIX5Q8N196 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
SIX5Q8N196 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
SIX5Q8N196 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
SIX5Q8N196 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SIX5Q8N196 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SIX5Q8N196 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC21.69■■□□□ 1.06
SIX5Q8N196 ECEL1P3-201ENST00000427961 737 ntBASIC21.69■■□□□ 1.06
SIX5Q8N196 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC21.69■■□□□ 1.06
SIX5Q8N196 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC21.69■■□□□ 1.06
SIX5Q8N196 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC21.69■■□□□ 1.06
SIX5Q8N196 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
SIX5Q8N196 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC21.69■■□□□ 1.06
SIX5Q8N196 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC21.69■■□□□ 1.06
SIX5Q8N196 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC21.69■■□□□ 1.06
SIX5Q8N196 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC21.69■■□□□ 1.06
SIX5Q8N196 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SIX5Q8N196 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC21.69■■□□□ 1.06
SIX5Q8N196 AP006587.3-201ENST00000525742 1516 ntBASIC21.69■■□□□ 1.06
SIX5Q8N196 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
SIX5Q8N196 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
SIX5Q8N196 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC21.69■■□□□ 1.06
SIX5Q8N196 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC21.69■■□□□ 1.06
SIX5Q8N196 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SIX5Q8N196 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SIX5Q8N196 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SIX5Q8N196 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
SIX5Q8N196 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
SIX5Q8N196 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SIX5Q8N196 MIR718-201ENST00000390190 70 ntBASIC21.68■■□□□ 1.06
SIX5Q8N196 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SIX5Q8N196 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC21.68■■□□□ 1.06
SIX5Q8N196 LSM12P1-201ENST00000411836 588 ntBASIC21.68■■□□□ 1.06
SIX5Q8N196 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC21.68■■□□□ 1.06
SIX5Q8N196 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC21.68■■□□□ 1.06
SIX5Q8N196 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC21.68■■□□□ 1.06
SIX5Q8N196 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SIX5Q8N196 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC21.68■■□□□ 1.06
SIX5Q8N196 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SIX5Q8N196 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
SIX5Q8N196 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
SIX5Q8N196 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SIX5Q8N196 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SIX5Q8N196 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SIX5Q8N196 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SIX5Q8N196 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
SIX5Q8N196 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SIX5Q8N196 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
SIX5Q8N196 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SIX5Q8N196 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC21.67■■□□□ 1.06
SIX5Q8N196 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC21.67■■□□□ 1.06
SIX5Q8N196 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SIX5Q8N196 MIR1224-201ENST00000408193 85 ntBASIC21.67■■□□□ 1.06
SIX5Q8N196 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
SIX5Q8N196 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC21.67■■□□□ 1.06
SIX5Q8N196 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC21.67■■□□□ 1.06
SIX5Q8N196 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC21.67■■□□□ 1.06
SIX5Q8N196 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC21.67■■□□□ 1.06
SIX5Q8N196 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SIX5Q8N196 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SIX5Q8N196 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
SIX5Q8N196 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
SIX5Q8N196 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SIX5Q8N196 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
SIX5Q8N196 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SIX5Q8N196 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SIX5Q8N196 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SIX5Q8N196 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SIX5Q8N196 GATS-209ENST00000454084 1030 ntTSL 3 BASIC21.66■■□□□ 1.06
SIX5Q8N196 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC21.66■■□□□ 1.06
SIX5Q8N196 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC21.66■■□□□ 1.06
SIX5Q8N196 FGF8-207ENST00000618991 856 ntTSL 3 BASIC21.66■■□□□ 1.06
SIX5Q8N196 AC073912.3-201ENST00000624414 853 ntBASIC21.66■■□□□ 1.06
SIX5Q8N196 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SIX5Q8N196 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC21.66■■□□□ 1.06
SIX5Q8N196 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
SIX5Q8N196 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
SIX5Q8N196 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SIX5Q8N196 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SIX5Q8N196 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SIX5Q8N196 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC21.65■■□□□ 1.06
SIX5Q8N196 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
SIX5Q8N196 RBM17P2-201ENST00000616397 1405 ntBASIC21.65■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms