Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC116Q8IYX3 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC116Q8IYX3 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC116Q8IYX3 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC116Q8IYX3 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC19.91■□□□□ 0.78
CCDC116Q8IYX3 ZNRF2P3-201ENST00000424200 374 ntBASIC19.91■□□□□ 0.78
CCDC116Q8IYX3 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC19.91■□□□□ 0.78
CCDC116Q8IYX3 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
CCDC116Q8IYX3 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
CCDC116Q8IYX3 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC116Q8IYX3 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC116Q8IYX3 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.9■□□□□ 0.78
CCDC116Q8IYX3 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC19.9■□□□□ 0.78
CCDC116Q8IYX3 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC116Q8IYX3 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.9■□□□□ 0.78
CCDC116Q8IYX3 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.9■□□□□ 0.78
CCDC116Q8IYX3 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC116Q8IYX3 JTB-203ENST00000368589 1216 ntTSL 2 BASIC19.9■□□□□ 0.78
CCDC116Q8IYX3 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC116Q8IYX3 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.9■□□□□ 0.78
CCDC116Q8IYX3 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.9■□□□□ 0.78
CCDC116Q8IYX3 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC116Q8IYX3 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC116Q8IYX3 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC116Q8IYX3 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
CCDC116Q8IYX3 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC116Q8IYX3 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.9■□□□□ 0.78
CCDC116Q8IYX3 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC116Q8IYX3 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC116Q8IYX3 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC116Q8IYX3 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC116Q8IYX3 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC116Q8IYX3 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC116Q8IYX3 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19.89■□□□□ 0.77
CCDC116Q8IYX3 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC116Q8IYX3 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.89■□□□□ 0.77
CCDC116Q8IYX3 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC19.89■□□□□ 0.77
CCDC116Q8IYX3 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC116Q8IYX3 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC116Q8IYX3 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC116Q8IYX3 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC116Q8IYX3 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC116Q8IYX3 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC116Q8IYX3 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC116Q8IYX3 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC116Q8IYX3 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC116Q8IYX3 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC116Q8IYX3 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC116Q8IYX3 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.88■□□□□ 0.77
CCDC116Q8IYX3 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC116Q8IYX3 AC027612.3-201ENST00000413684 1047 ntBASIC19.88■□□□□ 0.77
CCDC116Q8IYX3 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.88■□□□□ 0.77
CCDC116Q8IYX3 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC116Q8IYX3 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC116Q8IYX3 AC005229.4-201ENST00000610085 2198 ntBASIC19.88■□□□□ 0.77
CCDC116Q8IYX3 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC116Q8IYX3 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC116Q8IYX3 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
CCDC116Q8IYX3 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
CCDC116Q8IYX3 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC116Q8IYX3 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.88■□□□□ 0.77
CCDC116Q8IYX3 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC116Q8IYX3 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
CCDC116Q8IYX3 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC116Q8IYX3 AF106564.1-201ENST00000607058 2553 ntBASIC19.87■□□□□ 0.77
CCDC116Q8IYX3 AK1-201ENST00000223836 736 ntTSL 3 BASIC19.87■□□□□ 0.77
CCDC116Q8IYX3 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
CCDC116Q8IYX3 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.87■□□□□ 0.77
CCDC116Q8IYX3 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC116Q8IYX3 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC116Q8IYX3 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC116Q8IYX3 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC116Q8IYX3 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC116Q8IYX3 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
CCDC116Q8IYX3 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC116Q8IYX3 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC116Q8IYX3 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC116Q8IYX3 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.86■□□□□ 0.77
CCDC116Q8IYX3 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC116Q8IYX3 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC116Q8IYX3 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC116Q8IYX3 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC116Q8IYX3 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC116Q8IYX3 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC19.86■□□□□ 0.77
CCDC116Q8IYX3 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC19.86■□□□□ 0.77
CCDC116Q8IYX3 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.86■□□□□ 0.77
CCDC116Q8IYX3 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
CCDC116Q8IYX3 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC116Q8IYX3 FEM1AP4-201ENST00000443167 1987 ntBASIC19.86■□□□□ 0.77
CCDC116Q8IYX3 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC116Q8IYX3 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC116Q8IYX3 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
CCDC116Q8IYX3 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC116Q8IYX3 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
CCDC116Q8IYX3 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.85■□□□□ 0.77
CCDC116Q8IYX3 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.85■□□□□ 0.77
CCDC116Q8IYX3 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.85■□□□□ 0.77
CCDC116Q8IYX3 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC116Q8IYX3 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC116Q8IYX3 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms