Protein–RNA interactions for Protein: Q8IYI8

ZNF440, Zinc finger protein 440, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440Q8IYI8 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
ZNF440Q8IYI8 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.34■□□□□ 0.69
ZNF440Q8IYI8 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
ZNF440Q8IYI8 IRS3P-201ENST00000223076 1006 ntBASIC19.34■□□□□ 0.69
ZNF440Q8IYI8 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.34■□□□□ 0.69
ZNF440Q8IYI8 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ZNF440Q8IYI8 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
ZNF440Q8IYI8 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ZNF440Q8IYI8 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ZNF440Q8IYI8 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.34■□□□□ 0.69
ZNF440Q8IYI8 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ZNF440Q8IYI8 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ZNF440Q8IYI8 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
ZNF440Q8IYI8 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
ZNF440Q8IYI8 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
ZNF440Q8IYI8 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
ZNF440Q8IYI8 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
ZNF440Q8IYI8 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.33■□□□□ 0.69
ZNF440Q8IYI8 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
ZNF440Q8IYI8 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
ZNF440Q8IYI8 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
ZNF440Q8IYI8 MIR638-201ENST00000385237 100 ntBASIC19.33■□□□□ 0.68
ZNF440Q8IYI8 NT5C3AP1-201ENST00000394500 1012 ntBASIC19.33■□□□□ 0.68
ZNF440Q8IYI8 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19.33■□□□□ 0.68
ZNF440Q8IYI8 AC105265.2-201ENST00000467189 838 ntBASIC19.33■□□□□ 0.68
ZNF440Q8IYI8 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC19.33■□□□□ 0.68
ZNF440Q8IYI8 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.33■□□□□ 0.68
ZNF440Q8IYI8 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.33■□□□□ 0.68
ZNF440Q8IYI8 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
ZNF440Q8IYI8 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
ZNF440Q8IYI8 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ZNF440Q8IYI8 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
ZNF440Q8IYI8 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ZNF440Q8IYI8 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ZNF440Q8IYI8 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ZNF440Q8IYI8 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ZNF440Q8IYI8 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ZNF440Q8IYI8 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ZNF440Q8IYI8 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
ZNF440Q8IYI8 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ZNF440Q8IYI8 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.32■□□□□ 0.68
ZNF440Q8IYI8 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
ZNF440Q8IYI8 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ZNF440Q8IYI8 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ZNF440Q8IYI8 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ZNF440Q8IYI8 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.32■□□□□ 0.68
ZNF440Q8IYI8 MTURN-203ENST00000409688 843 ntTSL 2 BASIC19.32■□□□□ 0.68
ZNF440Q8IYI8 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ZNF440Q8IYI8 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ZNF440Q8IYI8 TPRG1LP1-201ENST00000598702 760 ntBASIC19.32■□□□□ 0.68
ZNF440Q8IYI8 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ZNF440Q8IYI8 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.32■□□□□ 0.68
ZNF440Q8IYI8 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
ZNF440Q8IYI8 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.32■□□□□ 0.68
ZNF440Q8IYI8 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ZNF440Q8IYI8 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ZNF440Q8IYI8 FEM1AP4-201ENST00000443167 1987 ntBASIC19.32■□□□□ 0.68
ZNF440Q8IYI8 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.32■□□□□ 0.68
ZNF440Q8IYI8 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ZNF440Q8IYI8 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ZNF440Q8IYI8 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.31■□□□□ 0.68
ZNF440Q8IYI8 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ZNF440Q8IYI8 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC19.31■□□□□ 0.68
ZNF440Q8IYI8 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.31■□□□□ 0.68
ZNF440Q8IYI8 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ZNF440Q8IYI8 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ZNF440Q8IYI8 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
ZNF440Q8IYI8 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ZNF440Q8IYI8 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
ZNF440Q8IYI8 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.31■□□□□ 0.68
ZNF440Q8IYI8 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC19.3■□□□□ 0.68
ZNF440Q8IYI8 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
ZNF440Q8IYI8 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.3■□□□□ 0.68
ZNF440Q8IYI8 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ZNF440Q8IYI8 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ZNF440Q8IYI8 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ZNF440Q8IYI8 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ZNF440Q8IYI8 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ZNF440Q8IYI8 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.3■□□□□ 0.68
ZNF440Q8IYI8 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.3■□□□□ 0.68
ZNF440Q8IYI8 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ZNF440Q8IYI8 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC19.3■□□□□ 0.68
ZNF440Q8IYI8 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.3■□□□□ 0.68
ZNF440Q8IYI8 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ZNF440Q8IYI8 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.3■□□□□ 0.68
ZNF440Q8IYI8 STX5-203ENST00000394690 1568 ntTSL 5 BASIC19.3■□□□□ 0.68
ZNF440Q8IYI8 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
ZNF440Q8IYI8 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
ZNF440Q8IYI8 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
ZNF440Q8IYI8 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
ZNF440Q8IYI8 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.3■□□□□ 0.68
ZNF440Q8IYI8 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ZNF440Q8IYI8 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.3■□□□□ 0.68
ZNF440Q8IYI8 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
ZNF440Q8IYI8 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ZNF440Q8IYI8 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ZNF440Q8IYI8 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ZNF440Q8IYI8 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ZNF440Q8IYI8 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ZNF440Q8IYI8 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms