Protein–RNA interactions for Protein: Q8IY21

DDX60, Probable ATP-dependent RNA helicase DDX60, humanhuman

Known RBP Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX60Q8IY21 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC26.35■■□□□ 1.81
DDX60Q8IY21 MIPEPP3-201ENST00000412105 444 ntBASIC26.34■■□□□ 1.81
DDX60Q8IY21 CD44-222ENST00000526025 1052 ntTSL 2 BASIC26.34■■□□□ 1.81
DDX60Q8IY21 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC26.34■■□□□ 1.81
DDX60Q8IY21 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC26.34■■□□□ 1.81
DDX60Q8IY21 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
DDX60Q8IY21 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC26.34■■□□□ 1.81
DDX60Q8IY21 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
DDX60Q8IY21 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC26.34■■□□□ 1.81
DDX60Q8IY21 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
DDX60Q8IY21 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC26.34■■□□□ 1.81
DDX60Q8IY21 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC26.34■■□□□ 1.81
DDX60Q8IY21 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
DDX60Q8IY21 AL162412.1-201ENST00000567129 965 ntBASIC26.34■■□□□ 1.81
DDX60Q8IY21 AC069236.1-201ENST00000604339 616 ntBASIC26.34■■□□□ 1.81
DDX60Q8IY21 AC243732.1-201ENST00000612648 864 ntBASIC26.34■■□□□ 1.81
DDX60Q8IY21 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC26.33■■□□□ 1.81
DDX60Q8IY21 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC26.33■■□□□ 1.81
DDX60Q8IY21 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
DDX60Q8IY21 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC26.33■■□□□ 1.81
DDX60Q8IY21 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC26.33■■□□□ 1.81
DDX60Q8IY21 AC092118.2-201ENST00000613495 667 ntBASIC26.33■■□□□ 1.81
DDX60Q8IY21 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC26.33■■□□□ 1.81
DDX60Q8IY21 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC26.33■■□□□ 1.81
DDX60Q8IY21 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
DDX60Q8IY21 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC26.33■■□□□ 1.81
DDX60Q8IY21 ME2-208ENST00000638937 2471 ntTSL 5 BASIC26.32■■□□□ 1.8
DDX60Q8IY21 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC26.32■■□□□ 1.8
DDX60Q8IY21 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
DDX60Q8IY21 BX276092.2-201ENST00000417668 665 ntBASIC26.32■■□□□ 1.8
DDX60Q8IY21 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC26.32■■□□□ 1.8
DDX60Q8IY21 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
DDX60Q8IY21 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC26.32■■□□□ 1.8
DDX60Q8IY21 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
DDX60Q8IY21 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC26.32■■□□□ 1.8
DDX60Q8IY21 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
DDX60Q8IY21 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
DDX60Q8IY21 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC26.32■■□□□ 1.8
DDX60Q8IY21 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
DDX60Q8IY21 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC26.31■■□□□ 1.8
DDX60Q8IY21 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC26.31■■□□□ 1.8
DDX60Q8IY21 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC26.31■■□□□ 1.8
DDX60Q8IY21 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC26.31■■□□□ 1.8
DDX60Q8IY21 AL512625.2-201ENST00000417533 625 ntBASIC26.31■■□□□ 1.8
DDX60Q8IY21 RNA5SP413-201ENST00000516373 109 ntBASIC26.31■■□□□ 1.8
DDX60Q8IY21 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC26.31■■□□□ 1.8
DDX60Q8IY21 AC120498.10-201ENST00000621827 505 ntBASIC26.31■■□□□ 1.8
DDX60Q8IY21 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC26.31■■□□□ 1.8
DDX60Q8IY21 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
DDX60Q8IY21 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
DDX60Q8IY21 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
DDX60Q8IY21 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC26.31■■□□□ 1.8
DDX60Q8IY21 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC26.31■■□□□ 1.8
DDX60Q8IY21 AC010980.2-201ENST00000587099 1412 ntBASIC26.31■■□□□ 1.8
DDX60Q8IY21 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
DDX60Q8IY21 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
DDX60Q8IY21 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
DDX60Q8IY21 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC26.31■■□□□ 1.8
DDX60Q8IY21 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC26.31■■□□□ 1.8
DDX60Q8IY21 ISCU-212ENST00000547005 795 ntTSL 3 BASIC26.31■■□□□ 1.8
DDX60Q8IY21 TMEM191A-211ENST00000637163 1067 ntBASIC26.31■■□□□ 1.8
DDX60Q8IY21 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC26.31■■□□□ 1.8
DDX60Q8IY21 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC26.3■■□□□ 1.8
DDX60Q8IY21 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
DDX60Q8IY21 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
DDX60Q8IY21 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
DDX60Q8IY21 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC26.3■■□□□ 1.8
DDX60Q8IY21 DUSP5P2-201ENST00000426873 1033 ntBASIC26.3■■□□□ 1.8
DDX60Q8IY21 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
DDX60Q8IY21 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC26.3■■□□□ 1.8
DDX60Q8IY21 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
DDX60Q8IY21 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC26.29■■□□□ 1.8
DDX60Q8IY21 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
DDX60Q8IY21 FAM99A-202ENST00000538190 1989 ntBASIC26.29■■□□□ 1.8
DDX60Q8IY21 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
DDX60Q8IY21 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC26.29■■□□□ 1.8
DDX60Q8IY21 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC26.29■■□□□ 1.8
DDX60Q8IY21 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC26.29■■□□□ 1.8
DDX60Q8IY21 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
DDX60Q8IY21 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
DDX60Q8IY21 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC26.29■■□□□ 1.8
DDX60Q8IY21 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC26.29■■□□□ 1.8
DDX60Q8IY21 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC26.28■■□□□ 1.8
DDX60Q8IY21 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
DDX60Q8IY21 AC066615.1-201ENST00000640911 628 ntBASIC26.28■■□□□ 1.8
DDX60Q8IY21 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC26.28■■□□□ 1.8
DDX60Q8IY21 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
DDX60Q8IY21 RHEB-204ENST00000472642 900 ntTSL 3 BASIC26.28■■□□□ 1.8
DDX60Q8IY21 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
DDX60Q8IY21 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC26.28■■□□□ 1.8
DDX60Q8IY21 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC26.28■■□□□ 1.8
DDX60Q8IY21 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC26.27■■□□□ 1.8
DDX60Q8IY21 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC26.27■■□□□ 1.8
DDX60Q8IY21 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC26.27■■□□□ 1.8
DDX60Q8IY21 RARRES2P4-201ENST00000514074 484 ntBASIC26.27■■□□□ 1.8
DDX60Q8IY21 MIR4758-201ENST00000577688 71 ntBASIC26.27■■□□□ 1.8
DDX60Q8IY21 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC26.27■■□□□ 1.8
DDX60Q8IY21 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
DDX60Q8IY21 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
DDX60Q8IY21 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC26.26■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms