Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
NUDCD3Q8IVD9 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NUDCD3Q8IVD9 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
NUDCD3Q8IVD9 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.95■□□□□ 0.95
NUDCD3Q8IVD9 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
NUDCD3Q8IVD9 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
NUDCD3Q8IVD9 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.95■□□□□ 0.94
NUDCD3Q8IVD9 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NUDCD3Q8IVD9 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
NUDCD3Q8IVD9 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.95■□□□□ 0.94
NUDCD3Q8IVD9 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NUDCD3Q8IVD9 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NUDCD3Q8IVD9 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
NUDCD3Q8IVD9 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NUDCD3Q8IVD9 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.95■□□□□ 0.94
NUDCD3Q8IVD9 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NUDCD3Q8IVD9 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NUDCD3Q8IVD9 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
NUDCD3Q8IVD9 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
NUDCD3Q8IVD9 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
NUDCD3Q8IVD9 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
NUDCD3Q8IVD9 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NUDCD3Q8IVD9 AL121603.2-201ENST00000557373 2117 ntBASIC20.95■□□□□ 0.94
NUDCD3Q8IVD9 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NUDCD3Q8IVD9 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
NUDCD3Q8IVD9 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
NUDCD3Q8IVD9 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NUDCD3Q8IVD9 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NUDCD3Q8IVD9 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.94■□□□□ 0.94
NUDCD3Q8IVD9 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NUDCD3Q8IVD9 AC099791.2-201ENST00000605725 427 ntBASIC20.94■□□□□ 0.94
NUDCD3Q8IVD9 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
NUDCD3Q8IVD9 AC003102.1-202ENST00000563394 1796 ntBASIC20.94■□□□□ 0.94
NUDCD3Q8IVD9 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NUDCD3Q8IVD9 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
NUDCD3Q8IVD9 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
NUDCD3Q8IVD9 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NUDCD3Q8IVD9 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
NUDCD3Q8IVD9 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC20.93■□□□□ 0.94
NUDCD3Q8IVD9 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.93■□□□□ 0.94
NUDCD3Q8IVD9 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.93■□□□□ 0.94
NUDCD3Q8IVD9 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NUDCD3Q8IVD9 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
NUDCD3Q8IVD9 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NUDCD3Q8IVD9 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
NUDCD3Q8IVD9 AL034346.1-201ENST00000568244 1277 ntBASIC20.93■□□□□ 0.94
NUDCD3Q8IVD9 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC20.93■□□□□ 0.94
NUDCD3Q8IVD9 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NUDCD3Q8IVD9 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NUDCD3Q8IVD9 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
NUDCD3Q8IVD9 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.93■□□□□ 0.94
NUDCD3Q8IVD9 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NUDCD3Q8IVD9 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
NUDCD3Q8IVD9 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NUDCD3Q8IVD9 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
NUDCD3Q8IVD9 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NUDCD3Q8IVD9 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
NUDCD3Q8IVD9 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
NUDCD3Q8IVD9 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NUDCD3Q8IVD9 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
NUDCD3Q8IVD9 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
NUDCD3Q8IVD9 OR2I1P-207ENST00000453522 948 ntBASIC20.92■□□□□ 0.94
NUDCD3Q8IVD9 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.92■□□□□ 0.94
NUDCD3Q8IVD9 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
NUDCD3Q8IVD9 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
NUDCD3Q8IVD9 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
NUDCD3Q8IVD9 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
NUDCD3Q8IVD9 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NUDCD3Q8IVD9 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NUDCD3Q8IVD9 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
NUDCD3Q8IVD9 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NUDCD3Q8IVD9 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NUDCD3Q8IVD9 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NUDCD3Q8IVD9 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NUDCD3Q8IVD9 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.92■□□□□ 0.94
NUDCD3Q8IVD9 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
NUDCD3Q8IVD9 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
NUDCD3Q8IVD9 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
NUDCD3Q8IVD9 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
NUDCD3Q8IVD9 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NUDCD3Q8IVD9 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
NUDCD3Q8IVD9 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
NUDCD3Q8IVD9 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
NUDCD3Q8IVD9 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
NUDCD3Q8IVD9 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
NUDCD3Q8IVD9 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.91■□□□□ 0.94
NUDCD3Q8IVD9 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.91■□□□□ 0.94
NUDCD3Q8IVD9 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
NUDCD3Q8IVD9 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.9■□□□□ 0.94
NUDCD3Q8IVD9 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
NUDCD3Q8IVD9 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
NUDCD3Q8IVD9 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
NUDCD3Q8IVD9 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NUDCD3Q8IVD9 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
NUDCD3Q8IVD9 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.9■□□□□ 0.94
NUDCD3Q8IVD9 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NUDCD3Q8IVD9 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
NUDCD3Q8IVD9 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NUDCD3Q8IVD9 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.9■□□□□ 0.94
NUDCD3Q8IVD9 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms