Protein–RNA interactions for Protein: Q86YL7

PDPN, Podoplanin, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDPNQ86YL7 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PDPNQ86YL7 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
PDPNQ86YL7 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.34
PDPNQ86YL7 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PDPNQ86YL7 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
PDPNQ86YL7 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC17.14■□□□□ 0.33
PDPNQ86YL7 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PDPNQ86YL7 USP48-205ENST00000421625 2818 ntTSL 2 BASIC17.14■□□□□ 0.33
PDPNQ86YL7 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
PDPNQ86YL7 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
PDPNQ86YL7 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC17.14■□□□□ 0.33
PDPNQ86YL7 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PDPNQ86YL7 EBPL-204ENST00000378272 766 ntTSL 3 BASIC17.14■□□□□ 0.33
PDPNQ86YL7 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
PDPNQ86YL7 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PDPNQ86YL7 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC17.14■□□□□ 0.33
PDPNQ86YL7 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PDPNQ86YL7 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PDPNQ86YL7 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PDPNQ86YL7 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PDPNQ86YL7 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC17.14■□□□□ 0.33
PDPNQ86YL7 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PDPNQ86YL7 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
PDPNQ86YL7 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PDPNQ86YL7 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PDPNQ86YL7 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC17.13■□□□□ 0.33
PDPNQ86YL7 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC17.13■□□□□ 0.33
PDPNQ86YL7 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
PDPNQ86YL7 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PDPNQ86YL7 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PDPNQ86YL7 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
PDPNQ86YL7 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC17.13■□□□□ 0.33
PDPNQ86YL7 AL031432.3-201ENST00000607698 485 ntBASIC17.13■□□□□ 0.33
PDPNQ86YL7 AL136967.2-201ENST00000623968 743 ntBASIC17.13■□□□□ 0.33
PDPNQ86YL7 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PDPNQ86YL7 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PDPNQ86YL7 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC17.13■□□□□ 0.33
PDPNQ86YL7 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PDPNQ86YL7 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PDPNQ86YL7 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC17.13■□□□□ 0.33
PDPNQ86YL7 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC17.13■□□□□ 0.33
PDPNQ86YL7 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PDPNQ86YL7 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PDPNQ86YL7 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC17.12■□□□□ 0.33
PDPNQ86YL7 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
PDPNQ86YL7 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC17.12■□□□□ 0.33
PDPNQ86YL7 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PDPNQ86YL7 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC17.12■□□□□ 0.33
PDPNQ86YL7 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
PDPNQ86YL7 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PDPNQ86YL7 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PDPNQ86YL7 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PDPNQ86YL7 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC17.11■□□□□ 0.33
PDPNQ86YL7 BX005040.4-201ENST00000637145 1518 ntBASIC17.11■□□□□ 0.33
PDPNQ86YL7 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PDPNQ86YL7 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PDPNQ86YL7 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC17.11■□□□□ 0.33
PDPNQ86YL7 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PDPNQ86YL7 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC17.11■□□□□ 0.33
PDPNQ86YL7 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
PDPNQ86YL7 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PDPNQ86YL7 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PDPNQ86YL7 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
PDPNQ86YL7 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PDPNQ86YL7 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PDPNQ86YL7 FXN-202ENST00000396364 980 ntTSL 5 BASIC17.11■□□□□ 0.33
PDPNQ86YL7 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC17.11■□□□□ 0.33
PDPNQ86YL7 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PDPNQ86YL7 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PDPNQ86YL7 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC17.11■□□□□ 0.33
PDPNQ86YL7 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
PDPNQ86YL7 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC17.11■□□□□ 0.33
PDPNQ86YL7 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC17.1■□□□□ 0.33
PDPNQ86YL7 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PDPNQ86YL7 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PDPNQ86YL7 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PDPNQ86YL7 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PDPNQ86YL7 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC17.1■□□□□ 0.33
PDPNQ86YL7 SUDS3P1-201ENST00000505831 966 ntBASIC17.1■□□□□ 0.33
PDPNQ86YL7 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC17.1■□□□□ 0.33
PDPNQ86YL7 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PDPNQ86YL7 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC17.1■□□□□ 0.33
PDPNQ86YL7 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC17.1■□□□□ 0.33
PDPNQ86YL7 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
PDPNQ86YL7 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PDPNQ86YL7 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC17.1■□□□□ 0.33
PDPNQ86YL7 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC17.1■□□□□ 0.33
PDPNQ86YL7 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PDPNQ86YL7 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
PDPNQ86YL7 AC005224.4-201ENST00000583262 1652 ntBASIC17.1■□□□□ 0.33
PDPNQ86YL7 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
PDPNQ86YL7 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
PDPNQ86YL7 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PDPNQ86YL7 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PDPNQ86YL7 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PDPNQ86YL7 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC17.09■□□□□ 0.33
PDPNQ86YL7 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
PDPNQ86YL7 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
PDPNQ86YL7 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC17.09■□□□□ 0.33
PDPNQ86YL7 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms