Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC18.34■□□□□ 0.53
LRRTM1Q86UE6 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRRTM1Q86UE6 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRRTM1Q86UE6 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRRTM1Q86UE6 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRRTM1Q86UE6 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRRTM1Q86UE6 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LRRTM1Q86UE6 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.34■□□□□ 0.53
LRRTM1Q86UE6 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
LRRTM1Q86UE6 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
LRRTM1Q86UE6 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC18.33■□□□□ 0.53
LRRTM1Q86UE6 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
LRRTM1Q86UE6 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
LRRTM1Q86UE6 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC18.33■□□□□ 0.52
LRRTM1Q86UE6 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC18.33■□□□□ 0.52
LRRTM1Q86UE6 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC18.33■□□□□ 0.52
LRRTM1Q86UE6 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
LRRTM1Q86UE6 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
LRRTM1Q86UE6 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.33■□□□□ 0.52
LRRTM1Q86UE6 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
LRRTM1Q86UE6 GABARAPL3-202ENST00000624044 1851 ntBASIC18.33■□□□□ 0.52
LRRTM1Q86UE6 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC18.33■□□□□ 0.52
LRRTM1Q86UE6 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.32■□□□□ 0.52
LRRTM1Q86UE6 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRRTM1Q86UE6 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRRTM1Q86UE6 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC18.32■□□□□ 0.52
LRRTM1Q86UE6 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.32■□□□□ 0.52
LRRTM1Q86UE6 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRRTM1Q86UE6 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRRTM1Q86UE6 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC18.32■□□□□ 0.52
LRRTM1Q86UE6 UNC93B8-201ENST00000511903 705 ntBASIC18.32■□□□□ 0.52
LRRTM1Q86UE6 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
LRRTM1Q86UE6 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
LRRTM1Q86UE6 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRRTM1Q86UE6 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRRTM1Q86UE6 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
LRRTM1Q86UE6 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRRTM1Q86UE6 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
LRRTM1Q86UE6 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRRTM1Q86UE6 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.31■□□□□ 0.52
LRRTM1Q86UE6 AP005212.1-201ENST00000581547 1997 ntBASIC18.31■□□□□ 0.52
LRRTM1Q86UE6 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
LRRTM1Q86UE6 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC18.31■□□□□ 0.52
LRRTM1Q86UE6 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRRTM1Q86UE6 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC18.31■□□□□ 0.52
LRRTM1Q86UE6 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRRTM1Q86UE6 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRRTM1Q86UE6 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.31■□□□□ 0.52
LRRTM1Q86UE6 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRRTM1Q86UE6 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRRTM1Q86UE6 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.31■□□□□ 0.52
LRRTM1Q86UE6 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC18.31■□□□□ 0.52
LRRTM1Q86UE6 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC18.31■□□□□ 0.52
LRRTM1Q86UE6 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC18.31■□□□□ 0.52
LRRTM1Q86UE6 AC010525.1-201ENST00000585559 441 ntBASIC18.31■□□□□ 0.52
LRRTM1Q86UE6 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRRTM1Q86UE6 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRRTM1Q86UE6 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRRTM1Q86UE6 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRRTM1Q86UE6 AP004607.7-201ENST00000527152 1677 ntBASIC18.31■□□□□ 0.52
LRRTM1Q86UE6 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC18.3■□□□□ 0.52
LRRTM1Q86UE6 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRRTM1Q86UE6 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.3■□□□□ 0.52
LRRTM1Q86UE6 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LRRTM1Q86UE6 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRRTM1Q86UE6 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.3■□□□□ 0.52
LRRTM1Q86UE6 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.3■□□□□ 0.52
LRRTM1Q86UE6 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRRTM1Q86UE6 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRRTM1Q86UE6 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LRRTM1Q86UE6 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC18.3■□□□□ 0.52
LRRTM1Q86UE6 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
LRRTM1Q86UE6 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRRTM1Q86UE6 AC006128.1-201ENST00000624704 1661 ntBASIC18.3■□□□□ 0.52
LRRTM1Q86UE6 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
LRRTM1Q86UE6 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRRTM1Q86UE6 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRRTM1Q86UE6 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRRTM1Q86UE6 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRRTM1Q86UE6 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRRTM1Q86UE6 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRRTM1Q86UE6 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
LRRTM1Q86UE6 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
LRRTM1Q86UE6 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRRTM1Q86UE6 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.3■□□□□ 0.52
LRRTM1Q86UE6 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LRRTM1Q86UE6 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRRTM1Q86UE6 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18.29■□□□□ 0.52
LRRTM1Q86UE6 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
LRRTM1Q86UE6 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRRTM1Q86UE6 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
LRRTM1Q86UE6 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRRTM1Q86UE6 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRRTM1Q86UE6 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRRTM1Q86UE6 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
LRRTM1Q86UE6 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRRTM1Q86UE6 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
LRRTM1Q86UE6 AK3-203ENST00000447596 705 ntTSL 2 BASIC18.29■□□□□ 0.52
LRRTM1Q86UE6 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC18.29■□□□□ 0.52
LRRTM1Q86UE6 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms