Protein–RNA interactions for Protein: Q86T96

RNF180, E3 ubiquitin-protein ligase RNF180, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF180Q86T96 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
RNF180Q86T96 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
RNF180Q86T96 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
RNF180Q86T96 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
RNF180Q86T96 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
RNF180Q86T96 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
RNF180Q86T96 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC23.59■■□□□ 1.37
RNF180Q86T96 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC23.59■■□□□ 1.37
RNF180Q86T96 CD44-222ENST00000526025 1052 ntTSL 2 BASIC23.59■■□□□ 1.37
RNF180Q86T96 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC23.59■■□□□ 1.37
RNF180Q86T96 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
RNF180Q86T96 RARG-204ENST00000543726 1779 ntTSL 2 BASIC23.59■■□□□ 1.37
RNF180Q86T96 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC23.59■■□□□ 1.37
RNF180Q86T96 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
RNF180Q86T96 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC23.59■■□□□ 1.37
RNF180Q86T96 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC23.58■■□□□ 1.37
RNF180Q86T96 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC23.58■■□□□ 1.37
RNF180Q86T96 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC23.58■■□□□ 1.37
RNF180Q86T96 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC23.58■■□□□ 1.37
RNF180Q86T96 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC23.58■■□□□ 1.37
RNF180Q86T96 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC23.58■■□□□ 1.37
RNF180Q86T96 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
RNF180Q86T96 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
RNF180Q86T96 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
RNF180Q86T96 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
RNF180Q86T96 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
RNF180Q86T96 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC23.58■■□□□ 1.36
RNF180Q86T96 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC23.58■■□□□ 1.36
RNF180Q86T96 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC23.57■■□□□ 1.36
RNF180Q86T96 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
RNF180Q86T96 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC23.57■■□□□ 1.36
RNF180Q86T96 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC23.57■■□□□ 1.36
RNF180Q86T96 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC23.57■■□□□ 1.36
RNF180Q86T96 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
RNF180Q86T96 AC137767.1-201ENST00000602918 1920 ntBASIC23.57■■□□□ 1.36
RNF180Q86T96 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
RNF180Q86T96 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC23.57■■□□□ 1.36
RNF180Q86T96 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC23.56■■□□□ 1.36
RNF180Q86T96 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
RNF180Q86T96 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC23.56■■□□□ 1.36
RNF180Q86T96 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
RNF180Q86T96 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC23.56■■□□□ 1.36
RNF180Q86T96 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC23.56■■□□□ 1.36
RNF180Q86T96 GATS-209ENST00000454084 1030 ntTSL 3 BASIC23.56■■□□□ 1.36
RNF180Q86T96 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC23.56■■□□□ 1.36
RNF180Q86T96 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC23.56■■□□□ 1.36
RNF180Q86T96 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC23.56■■□□□ 1.36
RNF180Q86T96 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
RNF180Q86T96 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
RNF180Q86T96 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
RNF180Q86T96 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
RNF180Q86T96 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
RNF180Q86T96 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
RNF180Q86T96 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC23.55■■□□□ 1.36
RNF180Q86T96 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC23.55■■□□□ 1.36
RNF180Q86T96 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
RNF180Q86T96 AC061975.6-201ENST00000579045 1553 ntBASIC23.55■■□□□ 1.36
RNF180Q86T96 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC23.55■■□□□ 1.36
RNF180Q86T96 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC23.55■■□□□ 1.36
RNF180Q86T96 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
RNF180Q86T96 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC23.54■■□□□ 1.36
RNF180Q86T96 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC23.54■■□□□ 1.36
RNF180Q86T96 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
RNF180Q86T96 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
RNF180Q86T96 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC23.54■■□□□ 1.36
RNF180Q86T96 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
RNF180Q86T96 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC23.54■■□□□ 1.36
RNF180Q86T96 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC23.54■■□□□ 1.36
RNF180Q86T96 UBE2SP1-201ENST00000450587 669 ntBASIC23.54■■□□□ 1.36
RNF180Q86T96 USP36-216ENST00000589424 970 ntTSL 5 BASIC23.54■■□□□ 1.36
RNF180Q86T96 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC23.54■■□□□ 1.36
RNF180Q86T96 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
RNF180Q86T96 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
RNF180Q86T96 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC23.53■■□□□ 1.36
RNF180Q86T96 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
RNF180Q86T96 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC23.53■■□□□ 1.36
RNF180Q86T96 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC23.53■■□□□ 1.36
RNF180Q86T96 AC008550.1-201ENST00000511500 884 ntBASIC23.53■■□□□ 1.36
RNF180Q86T96 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC23.53■■□□□ 1.36
RNF180Q86T96 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC23.53■■□□□ 1.36
RNF180Q86T96 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC23.53■■□□□ 1.36
RNF180Q86T96 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC23.53■■□□□ 1.36
RNF180Q86T96 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
RNF180Q86T96 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
RNF180Q86T96 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.36
RNF180Q86T96 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
RNF180Q86T96 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
RNF180Q86T96 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
RNF180Q86T96 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC23.52■■□□□ 1.36
RNF180Q86T96 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
RNF180Q86T96 PEX7-202ENST00000367756 680 ntTSL 3 BASIC23.52■■□□□ 1.36
RNF180Q86T96 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC23.52■■□□□ 1.36
RNF180Q86T96 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
RNF180Q86T96 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC23.52■■□□□ 1.36
RNF180Q86T96 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
RNF180Q86T96 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC23.52■■□□□ 1.36
RNF180Q86T96 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC23.52■■□□□ 1.36
RNF180Q86T96 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC23.52■■□□□ 1.36
RNF180Q86T96 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC23.52■■□□□ 1.36
RNF180Q86T96 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC23.52■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms