Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC13.18□□□□□ -0.3
VPS13BQ7Z7G8 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
VPS13BQ7Z7G8 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC13.18□□□□□ -0.3
VPS13BQ7Z7G8 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC13.18□□□□□ -0.3
VPS13BQ7Z7G8 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC13.18□□□□□ -0.3
VPS13BQ7Z7G8 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC13.18□□□□□ -0.3
VPS13BQ7Z7G8 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
VPS13BQ7Z7G8 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
VPS13BQ7Z7G8 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
VPS13BQ7Z7G8 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC13.17□□□□□ -0.3
VPS13BQ7Z7G8 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC13.17□□□□□ -0.3
VPS13BQ7Z7G8 ABHD17AP6-201ENST00000458502 1044 ntBASIC13.17□□□□□ -0.3
VPS13BQ7Z7G8 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
VPS13BQ7Z7G8 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC13.17□□□□□ -0.3
VPS13BQ7Z7G8 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
VPS13BQ7Z7G8 AC233263.1-201ENST00000578059 224 ntBASIC13.17□□□□□ -0.3
VPS13BQ7Z7G8 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
VPS13BQ7Z7G8 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC13.17□□□□□ -0.3
VPS13BQ7Z7G8 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC13.17□□□□□ -0.3
VPS13BQ7Z7G8 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
VPS13BQ7Z7G8 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC13.17□□□□□ -0.3
VPS13BQ7Z7G8 OR10C1-204ENST00000622521 1039 ntBASIC13.17□□□□□ -0.3
VPS13BQ7Z7G8 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
VPS13BQ7Z7G8 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC13.17□□□□□ -0.3
VPS13BQ7Z7G8 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
VPS13BQ7Z7G8 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
VPS13BQ7Z7G8 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC13.17□□□□□ -0.3
VPS13BQ7Z7G8 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC13.17□□□□□ -0.3
VPS13BQ7Z7G8 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
VPS13BQ7Z7G8 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC13.17□□□□□ -0.3
VPS13BQ7Z7G8 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC13.17□□□□□ -0.3
VPS13BQ7Z7G8 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
VPS13BQ7Z7G8 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
VPS13BQ7Z7G8 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC13.16□□□□□ -0.3
VPS13BQ7Z7G8 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
VPS13BQ7Z7G8 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
VPS13BQ7Z7G8 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
VPS13BQ7Z7G8 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC13.16□□□□□ -0.3
VPS13BQ7Z7G8 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
VPS13BQ7Z7G8 AL445228.2-201ENST00000605589 952 ntBASIC13.16□□□□□ -0.3
VPS13BQ7Z7G8 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
VPS13BQ7Z7G8 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
VPS13BQ7Z7G8 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
VPS13BQ7Z7G8 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC13.16□□□□□ -0.3
VPS13BQ7Z7G8 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
VPS13BQ7Z7G8 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
VPS13BQ7Z7G8 SLC29A4P2-201ENST00000504749 1089 ntBASIC13.16□□□□□ -0.3
VPS13BQ7Z7G8 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
VPS13BQ7Z7G8 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
VPS13BQ7Z7G8 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC13.16□□□□□ -0.3
VPS13BQ7Z7G8 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
VPS13BQ7Z7G8 AL359736.2-201ENST00000621992 437 ntBASIC13.16□□□□□ -0.3
VPS13BQ7Z7G8 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
VPS13BQ7Z7G8 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC13.16□□□□□ -0.3
VPS13BQ7Z7G8 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
VPS13BQ7Z7G8 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
VPS13BQ7Z7G8 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
VPS13BQ7Z7G8 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
VPS13BQ7Z7G8 MDFI-202ENST00000373050 809 ntTSL 2 BASIC13.15□□□□□ -0.3
VPS13BQ7Z7G8 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC13.15□□□□□ -0.3
VPS13BQ7Z7G8 UBE2SP1-201ENST00000450587 669 ntBASIC13.15□□□□□ -0.3
VPS13BQ7Z7G8 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC13.15□□□□□ -0.3
VPS13BQ7Z7G8 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC13.15□□□□□ -0.3
VPS13BQ7Z7G8 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
VPS13BQ7Z7G8 AC097658.1-201ENST00000475555 843 ntBASIC13.15□□□□□ -0.3
VPS13BQ7Z7G8 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
VPS13BQ7Z7G8 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
VPS13BQ7Z7G8 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC13.15□□□□□ -0.3
VPS13BQ7Z7G8 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC13.15□□□□□ -0.3
VPS13BQ7Z7G8 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
VPS13BQ7Z7G8 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
VPS13BQ7Z7G8 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
VPS13BQ7Z7G8 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
VPS13BQ7Z7G8 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
VPS13BQ7Z7G8 PKM-204ENST00000449901 2526 ntTSL 2 BASIC13.15□□□□□ -0.3
VPS13BQ7Z7G8 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
VPS13BQ7Z7G8 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
VPS13BQ7Z7G8 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
VPS13BQ7Z7G8 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
VPS13BQ7Z7G8 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC13.15□□□□□ -0.3
VPS13BQ7Z7G8 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
VPS13BQ7Z7G8 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.31
VPS13BQ7Z7G8 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
VPS13BQ7Z7G8 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
VPS13BQ7Z7G8 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC13.14□□□□□ -0.31
VPS13BQ7Z7G8 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC13.14□□□□□ -0.31
VPS13BQ7Z7G8 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
VPS13BQ7Z7G8 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC13.14□□□□□ -0.31
VPS13BQ7Z7G8 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
VPS13BQ7Z7G8 MIR718-201ENST00000390190 70 ntBASIC13.14□□□□□ -0.31
VPS13BQ7Z7G8 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
VPS13BQ7Z7G8 SNORA78-201ENST00000459373 127 ntBASIC13.14□□□□□ -0.31
VPS13BQ7Z7G8 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
VPS13BQ7Z7G8 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
VPS13BQ7Z7G8 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
VPS13BQ7Z7G8 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
VPS13BQ7Z7G8 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
VPS13BQ7Z7G8 REXO2-216ENST00000544196 452 ntTSL 3 BASIC13.13□□□□□ -0.31
VPS13BQ7Z7G8 AC008403.3-201ENST00000598924 454 ntBASIC13.13□□□□□ -0.31
VPS13BQ7Z7G8 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC13.13□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms