Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 C1QBPP2-201ENST00000528754 825 ntBASIC14.87□□□□□ -0.03
CSMD3Q7Z407 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC14.87□□□□□ -0.03
CSMD3Q7Z407 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC14.87□□□□□ -0.03
CSMD3Q7Z407 LTK-203ENST00000453182 2412 ntTSL 2 BASIC14.86□□□□□ -0.03
CSMD3Q7Z407 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
CSMD3Q7Z407 AC142381.3-201ENST00000568208 1670 ntBASIC14.86□□□□□ -0.03
CSMD3Q7Z407 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
CSMD3Q7Z407 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC14.86□□□□□ -0.03
CSMD3Q7Z407 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
CSMD3Q7Z407 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
CSMD3Q7Z407 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC14.86□□□□□ -0.03
CSMD3Q7Z407 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CSMD3Q7Z407 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CSMD3Q7Z407 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC14.86□□□□□ -0.03
CSMD3Q7Z407 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CSMD3Q7Z407 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC14.86□□□□□ -0.03
CSMD3Q7Z407 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CSMD3Q7Z407 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC14.86□□□□□ -0.03
CSMD3Q7Z407 SLC29A4P2-201ENST00000504749 1089 ntBASIC14.86□□□□□ -0.03
CSMD3Q7Z407 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CSMD3Q7Z407 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CSMD3Q7Z407 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
CSMD3Q7Z407 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
CSMD3Q7Z407 FXN-202ENST00000396364 980 ntTSL 5 BASIC14.85□□□□□ -0.03
CSMD3Q7Z407 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
CSMD3Q7Z407 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CSMD3Q7Z407 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC14.85□□□□□ -0.03
CSMD3Q7Z407 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CSMD3Q7Z407 AC069236.1-201ENST00000604339 616 ntBASIC14.85□□□□□ -0.03
CSMD3Q7Z407 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC14.85□□□□□ -0.03
CSMD3Q7Z407 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC14.85□□□□□ -0.03
CSMD3Q7Z407 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CSMD3Q7Z407 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC14.85□□□□□ -0.03
CSMD3Q7Z407 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CSMD3Q7Z407 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CSMD3Q7Z407 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CSMD3Q7Z407 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CSMD3Q7Z407 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
CSMD3Q7Z407 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
CSMD3Q7Z407 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC14.85□□□□□ -0.03
CSMD3Q7Z407 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
CSMD3Q7Z407 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CSMD3Q7Z407 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CSMD3Q7Z407 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CSMD3Q7Z407 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CSMD3Q7Z407 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CSMD3Q7Z407 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CSMD3Q7Z407 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CSMD3Q7Z407 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CSMD3Q7Z407 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CSMD3Q7Z407 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC14.84□□□□□ -0.03
CSMD3Q7Z407 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC14.84□□□□□ -0.03
CSMD3Q7Z407 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC14.84□□□□□ -0.03
CSMD3Q7Z407 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC14.84□□□□□ -0.03
CSMD3Q7Z407 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CSMD3Q7Z407 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CSMD3Q7Z407 GATS-209ENST00000454084 1030 ntTSL 3 BASIC14.84□□□□□ -0.03
CSMD3Q7Z407 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CSMD3Q7Z407 RPPH1-201ENST00000516869 333 ntBASIC14.84□□□□□ -0.03
CSMD3Q7Z407 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
CSMD3Q7Z407 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
CSMD3Q7Z407 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CSMD3Q7Z407 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
CSMD3Q7Z407 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CSMD3Q7Z407 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
CSMD3Q7Z407 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
CSMD3Q7Z407 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
CSMD3Q7Z407 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CSMD3Q7Z407 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
CSMD3Q7Z407 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
CSMD3Q7Z407 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC14.83□□□□□ -0.03
CSMD3Q7Z407 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
CSMD3Q7Z407 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
CSMD3Q7Z407 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
CSMD3Q7Z407 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
CSMD3Q7Z407 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC14.83□□□□□ -0.03
CSMD3Q7Z407 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
CSMD3Q7Z407 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC14.83□□□□□ -0.04
CSMD3Q7Z407 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CSMD3Q7Z407 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC14.83□□□□□ -0.04
CSMD3Q7Z407 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
CSMD3Q7Z407 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CSMD3Q7Z407 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC14.83□□□□□ -0.04
CSMD3Q7Z407 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC14.83□□□□□ -0.04
CSMD3Q7Z407 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.04
CSMD3Q7Z407 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CSMD3Q7Z407 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CSMD3Q7Z407 OR2A1-AS1-201ENST00000462305 773 ntBASIC14.83□□□□□ -0.04
CSMD3Q7Z407 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC14.83□□□□□ -0.04
CSMD3Q7Z407 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC14.83□□□□□ -0.04
CSMD3Q7Z407 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC14.83□□□□□ -0.04
CSMD3Q7Z407 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC14.83□□□□□ -0.04
CSMD3Q7Z407 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CSMD3Q7Z407 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
CSMD3Q7Z407 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC14.82□□□□□ -0.04
CSMD3Q7Z407 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CSMD3Q7Z407 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC14.82□□□□□ -0.04
CSMD3Q7Z407 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CSMD3Q7Z407 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
CSMD3Q7Z407 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms