Protein–RNA interactions for Protein: Q6VY07

PACS1, Phosphofurin acidic cluster sorting protein 1, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1Q6VY07 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC21.33■■□□□ 1.01
PACS1Q6VY07 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC21.33■■□□□ 1.01
PACS1Q6VY07 AL034346.1-201ENST00000568244 1277 ntBASIC21.33■■□□□ 1.01
PACS1Q6VY07 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1
PACS1Q6VY07 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
PACS1Q6VY07 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
PACS1Q6VY07 DYM-203ENST00000442713 2147 ntTSL 2 BASIC21.32■■□□□ 1
PACS1Q6VY07 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PACS1Q6VY07 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PACS1Q6VY07 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PACS1Q6VY07 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
PACS1Q6VY07 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PACS1Q6VY07 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PACS1Q6VY07 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PACS1Q6VY07 HYI-206ENST00000372434 1025 ntTSL 5 BASIC21.32■■□□□ 1
PACS1Q6VY07 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC21.32■■□□□ 1
PACS1Q6VY07 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC21.32■■□□□ 1
PACS1Q6VY07 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC21.32■■□□□ 1
PACS1Q6VY07 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC21.32■■□□□ 1
PACS1Q6VY07 AL121603.2-201ENST00000557373 2117 ntBASIC21.32■■□□□ 1
PACS1Q6VY07 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
PACS1Q6VY07 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC21.31■■□□□ 1
PACS1Q6VY07 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
PACS1Q6VY07 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC21.31■■□□□ 1
PACS1Q6VY07 AP004607.7-201ENST00000527152 1677 ntBASIC21.31■■□□□ 1
PACS1Q6VY07 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PACS1Q6VY07 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
PACS1Q6VY07 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PACS1Q6VY07 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PACS1Q6VY07 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC21.31■■□□□ 1
PACS1Q6VY07 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC21.31■■□□□ 1
PACS1Q6VY07 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PACS1Q6VY07 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
PACS1Q6VY07 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PACS1Q6VY07 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC21.31■■□□□ 1
PACS1Q6VY07 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
PACS1Q6VY07 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC21.3■■□□□ 1
PACS1Q6VY07 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC21.3■■□□□ 1
PACS1Q6VY07 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PACS1Q6VY07 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC21.3■■□□□ 1
PACS1Q6VY07 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PACS1Q6VY07 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
PACS1Q6VY07 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
PACS1Q6VY07 AC105265.2-201ENST00000467189 838 ntBASIC21.3■■□□□ 1
PACS1Q6VY07 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC21.3■■□□□ 1
PACS1Q6VY07 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC21.3■■□□□ 1
PACS1Q6VY07 AC105233.4-201ENST00000642045 216 ntBASIC21.3■■□□□ 1
PACS1Q6VY07 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.3■■□□□ 1
PACS1Q6VY07 AC003102.1-202ENST00000563394 1796 ntBASIC21.3■■□□□ 1
PACS1Q6VY07 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PACS1Q6VY07 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC21.3■■□□□ 1
PACS1Q6VY07 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC21.3■■□□□ 1
PACS1Q6VY07 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC21.29■■□□□ 1
PACS1Q6VY07 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PACS1Q6VY07 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PACS1Q6VY07 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC21.29■■□□□ 1
PACS1Q6VY07 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC21.29■■□□□ 1
PACS1Q6VY07 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC21.29■■□□□ 1
PACS1Q6VY07 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC21.29■■□□□ 1
PACS1Q6VY07 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PACS1Q6VY07 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC21.29■■□□□ 1
PACS1Q6VY07 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PACS1Q6VY07 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PACS1Q6VY07 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC21.29■■□□□ 1
PACS1Q6VY07 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PACS1Q6VY07 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC21.29■■□□□ 1
PACS1Q6VY07 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
PACS1Q6VY07 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
PACS1Q6VY07 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PACS1Q6VY07 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
PACS1Q6VY07 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC21.28■■□□□ 1
PACS1Q6VY07 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC21.28■■□□□ 1
PACS1Q6VY07 MFF-208ENST00000409616 1247 ntTSL 5 BASIC21.28■■□□□ 1
PACS1Q6VY07 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC21.28■■□□□ 1
PACS1Q6VY07 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC21.28■■□□□ 1
PACS1Q6VY07 RHOF-204ENST00000537265 699 ntTSL 2 BASIC21.28■■□□□ 1
PACS1Q6VY07 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC21.28■■□□□ 1
PACS1Q6VY07 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC21.28■■□□□ 1
PACS1Q6VY07 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC21.28■■□□□ 1
PACS1Q6VY07 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
PACS1Q6VY07 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PACS1Q6VY07 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC21.28■■□□□ 1
PACS1Q6VY07 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PACS1Q6VY07 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC21.28■■□□□ 1
PACS1Q6VY07 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PACS1Q6VY07 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC21.28■■□□□ 1
PACS1Q6VY07 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.27■■□□□ 1
PACS1Q6VY07 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PACS1Q6VY07 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PACS1Q6VY07 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
PACS1Q6VY07 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PACS1Q6VY07 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PACS1Q6VY07 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC21.27■■□□□ 1
PACS1Q6VY07 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
PACS1Q6VY07 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC21.27■■□□□ 1
PACS1Q6VY07 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC21.27■■□□□ 1
PACS1Q6VY07 STOX2-205ENST00000513034 807 ntTSL 3 BASIC21.27■■□□□ 1
PACS1Q6VY07 AC012414.1-201ENST00000556676 535 ntBASIC21.27■■□□□ 1
PACS1Q6VY07 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC21.27■■□□□ 1
PACS1Q6VY07 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC21.27■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms