Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC24.31■■□□□ 1.48
COL13A1Q5TAT6 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC24.31■■□□□ 1.48
COL13A1Q5TAT6 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
COL13A1Q5TAT6 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
COL13A1Q5TAT6 PVRIG2P-201ENST00000435460 978 ntBASIC24.31■■□□□ 1.48
COL13A1Q5TAT6 RARRES2P10-201ENST00000564312 460 ntBASIC24.31■■□□□ 1.48
COL13A1Q5TAT6 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC24.31■■□□□ 1.48
COL13A1Q5TAT6 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC24.31■■□□□ 1.48
COL13A1Q5TAT6 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC24.31■■□□□ 1.48
COL13A1Q5TAT6 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
COL13A1Q5TAT6 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
COL13A1Q5TAT6 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC24.3■■□□□ 1.48
COL13A1Q5TAT6 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC24.3■■□□□ 1.48
COL13A1Q5TAT6 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
COL13A1Q5TAT6 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC24.3■■□□□ 1.48
COL13A1Q5TAT6 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
COL13A1Q5TAT6 AC009947.2-201ENST00000444014 672 ntBASIC24.3■■□□□ 1.48
COL13A1Q5TAT6 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC24.3■■□□□ 1.48
COL13A1Q5TAT6 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC24.3■■□□□ 1.48
COL13A1Q5TAT6 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC24.3■■□□□ 1.48
COL13A1Q5TAT6 AC110285.5-201ENST00000611501 352 ntBASIC24.3■■□□□ 1.48
COL13A1Q5TAT6 MIR6089-201ENST00000616698 64 ntBASIC24.3■■□□□ 1.48
COL13A1Q5TAT6 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
COL13A1Q5TAT6 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC24.3■■□□□ 1.48
COL13A1Q5TAT6 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC24.29■■□□□ 1.48
COL13A1Q5TAT6 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
COL13A1Q5TAT6 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
COL13A1Q5TAT6 ISCU-203ENST00000431221 799 ntTSL 2 BASIC24.29■■□□□ 1.48
COL13A1Q5TAT6 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC24.29■■□□□ 1.48
COL13A1Q5TAT6 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC24.29■■□□□ 1.48
COL13A1Q5TAT6 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC24.29■■□□□ 1.48
COL13A1Q5TAT6 AC004263.2-201ENST00000617183 678 ntBASIC24.29■■□□□ 1.48
COL13A1Q5TAT6 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
COL13A1Q5TAT6 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
COL13A1Q5TAT6 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
COL13A1Q5TAT6 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
COL13A1Q5TAT6 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
COL13A1Q5TAT6 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC24.28■■□□□ 1.48
COL13A1Q5TAT6 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
COL13A1Q5TAT6 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC24.28■■□□□ 1.48
COL13A1Q5TAT6 AC239809.2-201ENST00000415381 517 ntBASIC24.28■■□□□ 1.48
COL13A1Q5TAT6 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC24.28■■□□□ 1.48
COL13A1Q5TAT6 AL355355.2-201ENST00000442321 338 ntBASIC24.28■■□□□ 1.48
COL13A1Q5TAT6 PBX1-209ENST00000485769 834 ntTSL 2 BASIC24.28■■□□□ 1.48
COL13A1Q5TAT6 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC24.28■■□□□ 1.48
COL13A1Q5TAT6 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC24.28■■□□□ 1.48
COL13A1Q5TAT6 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
COL13A1Q5TAT6 KLF2-202ENST00000592003 564 ntTSL 3 BASIC24.28■■□□□ 1.48
COL13A1Q5TAT6 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC24.27■■□□□ 1.48
COL13A1Q5TAT6 DUSP8P5-201ENST00000422884 1815 ntBASIC24.27■■□□□ 1.48
COL13A1Q5TAT6 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
COL13A1Q5TAT6 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
COL13A1Q5TAT6 GUK1-204ENST00000366721 689 ntTSL 3 BASIC24.27■■□□□ 1.48
COL13A1Q5TAT6 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
COL13A1Q5TAT6 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC24.27■■□□□ 1.48
COL13A1Q5TAT6 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC24.27■■□□□ 1.48
COL13A1Q5TAT6 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
COL13A1Q5TAT6 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
COL13A1Q5TAT6 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
COL13A1Q5TAT6 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC24.26■■□□□ 1.47
COL13A1Q5TAT6 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC24.26■■□□□ 1.47
COL13A1Q5TAT6 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
COL13A1Q5TAT6 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC24.26■■□□□ 1.47
COL13A1Q5TAT6 HES2-206ENST00000489730 730 ntTSL 2 BASIC24.26■■□□□ 1.47
COL13A1Q5TAT6 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
COL13A1Q5TAT6 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
COL13A1Q5TAT6 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC24.25■■□□□ 1.47
COL13A1Q5TAT6 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC24.25■■□□□ 1.47
COL13A1Q5TAT6 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
COL13A1Q5TAT6 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
COL13A1Q5TAT6 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
COL13A1Q5TAT6 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC24.25■■□□□ 1.47
COL13A1Q5TAT6 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC24.25■■□□□ 1.47
COL13A1Q5TAT6 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC24.25■■□□□ 1.47
COL13A1Q5TAT6 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC24.25■■□□□ 1.47
COL13A1Q5TAT6 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC24.24■■□□□ 1.47
COL13A1Q5TAT6 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC24.24■■□□□ 1.47
COL13A1Q5TAT6 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC24.24■■□□□ 1.47
COL13A1Q5TAT6 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
COL13A1Q5TAT6 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
COL13A1Q5TAT6 LTBR-211ENST00000543190 785 ntTSL 3 BASIC24.24■■□□□ 1.47
COL13A1Q5TAT6 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
COL13A1Q5TAT6 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
COL13A1Q5TAT6 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC24.24■■□□□ 1.47
COL13A1Q5TAT6 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
COL13A1Q5TAT6 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC24.24■■□□□ 1.47
COL13A1Q5TAT6 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
COL13A1Q5TAT6 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC24.23■■□□□ 1.47
COL13A1Q5TAT6 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
COL13A1Q5TAT6 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC24.23■■□□□ 1.47
COL13A1Q5TAT6 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC24.23■■□□□ 1.47
COL13A1Q5TAT6 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC24.23■■□□□ 1.47
COL13A1Q5TAT6 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
COL13A1Q5TAT6 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
COL13A1Q5TAT6 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
COL13A1Q5TAT6 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
COL13A1Q5TAT6 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
COL13A1Q5TAT6 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC24.22■■□□□ 1.47
COL13A1Q5TAT6 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC24.22■■□□□ 1.47
COL13A1Q5TAT6 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC24.22■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms