Protein–RNA interactions for Protein: Q53RY4

KRTCAP3, Keratinocyte-associated protein 3, humanhuman

Predictions only

Length 240 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTCAP3Q53RY4 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC18.99■□□□□ 0.63
KRTCAP3Q53RY4 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC18.99■□□□□ 0.63
KRTCAP3Q53RY4 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC18.99■□□□□ 0.63
KRTCAP3Q53RY4 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
KRTCAP3Q53RY4 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC18.99■□□□□ 0.63
KRTCAP3Q53RY4 MIR4651-201ENST00000582622 73 ntBASIC18.99■□□□□ 0.63
KRTCAP3Q53RY4 AC016405.3-201ENST00000607710 860 ntBASIC18.99■□□□□ 0.63
KRTCAP3Q53RY4 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
KRTCAP3Q53RY4 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
KRTCAP3Q53RY4 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
KRTCAP3Q53RY4 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC18.99■□□□□ 0.63
KRTCAP3Q53RY4 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC18.99■□□□□ 0.63
KRTCAP3Q53RY4 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
KRTCAP3Q53RY4 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
KRTCAP3Q53RY4 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC18.98■□□□□ 0.63
KRTCAP3Q53RY4 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC18.98■□□□□ 0.63
KRTCAP3Q53RY4 AC093787.1-201ENST00000450396 207 ntBASIC18.98■□□□□ 0.63
KRTCAP3Q53RY4 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC18.98■□□□□ 0.63
KRTCAP3Q53RY4 AC098934.4-201ENST00000564127 592 ntBASIC18.98■□□□□ 0.63
KRTCAP3Q53RY4 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
KRTCAP3Q53RY4 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC18.98■□□□□ 0.63
KRTCAP3Q53RY4 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC18.98■□□□□ 0.63
KRTCAP3Q53RY4 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
KRTCAP3Q53RY4 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
KRTCAP3Q53RY4 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC18.97■□□□□ 0.63
KRTCAP3Q53RY4 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
KRTCAP3Q53RY4 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC18.97■□□□□ 0.63
KRTCAP3Q53RY4 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC18.97■□□□□ 0.63
KRTCAP3Q53RY4 BX276092.2-201ENST00000417668 665 ntBASIC18.97■□□□□ 0.63
KRTCAP3Q53RY4 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC18.97■□□□□ 0.63
KRTCAP3Q53RY4 POU5F1P3-201ENST00000428824 1078 ntBASIC18.97■□□□□ 0.63
KRTCAP3Q53RY4 AC097658.1-201ENST00000475555 843 ntBASIC18.97■□□□□ 0.63
KRTCAP3Q53RY4 RNA5SP413-201ENST00000516373 109 ntBASIC18.97■□□□□ 0.63
KRTCAP3Q53RY4 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC18.97■□□□□ 0.63
KRTCAP3Q53RY4 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
KRTCAP3Q53RY4 AC066615.1-201ENST00000640911 628 ntBASIC18.97■□□□□ 0.63
KRTCAP3Q53RY4 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
KRTCAP3Q53RY4 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
KRTCAP3Q53RY4 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
KRTCAP3Q53RY4 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
KRTCAP3Q53RY4 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
KRTCAP3Q53RY4 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
KRTCAP3Q53RY4 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
KRTCAP3Q53RY4 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
KRTCAP3Q53RY4 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC18.96■□□□□ 0.63
KRTCAP3Q53RY4 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
KRTCAP3Q53RY4 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC18.96■□□□□ 0.63
KRTCAP3Q53RY4 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC18.96■□□□□ 0.63
KRTCAP3Q53RY4 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
KRTCAP3Q53RY4 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC18.96■□□□□ 0.63
KRTCAP3Q53RY4 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC18.96■□□□□ 0.63
KRTCAP3Q53RY4 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
KRTCAP3Q53RY4 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
KRTCAP3Q53RY4 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
KRTCAP3Q53RY4 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
KRTCAP3Q53RY4 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
KRTCAP3Q53RY4 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
KRTCAP3Q53RY4 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
KRTCAP3Q53RY4 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
KRTCAP3Q53RY4 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
KRTCAP3Q53RY4 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
KRTCAP3Q53RY4 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
KRTCAP3Q53RY4 RARRES2P4-201ENST00000514074 484 ntBASIC18.95■□□□□ 0.62
KRTCAP3Q53RY4 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC18.95■□□□□ 0.62
KRTCAP3Q53RY4 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
KRTCAP3Q53RY4 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
KRTCAP3Q53RY4 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
KRTCAP3Q53RY4 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
KRTCAP3Q53RY4 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
KRTCAP3Q53RY4 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
KRTCAP3Q53RY4 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC18.95■□□□□ 0.62
KRTCAP3Q53RY4 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC18.94■□□□□ 0.62
KRTCAP3Q53RY4 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
KRTCAP3Q53RY4 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
KRTCAP3Q53RY4 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC18.94■□□□□ 0.62
KRTCAP3Q53RY4 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
KRTCAP3Q53RY4 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
KRTCAP3Q53RY4 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
KRTCAP3Q53RY4 CD44-222ENST00000526025 1052 ntTSL 2 BASIC18.94■□□□□ 0.62
KRTCAP3Q53RY4 ISCU-212ENST00000547005 795 ntTSL 3 BASIC18.94■□□□□ 0.62
KRTCAP3Q53RY4 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
KRTCAP3Q53RY4 FGF8-207ENST00000618991 856 ntTSL 3 BASIC18.94■□□□□ 0.62
KRTCAP3Q53RY4 ITM2C-210ENST00000620962 501 ntBASIC18.94■□□□□ 0.62
KRTCAP3Q53RY4 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC18.94■□□□□ 0.62
KRTCAP3Q53RY4 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
KRTCAP3Q53RY4 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
KRTCAP3Q53RY4 AC010980.2-201ENST00000587099 1412 ntBASIC18.93■□□□□ 0.62
KRTCAP3Q53RY4 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
KRTCAP3Q53RY4 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
KRTCAP3Q53RY4 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC18.93■□□□□ 0.62
KRTCAP3Q53RY4 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC18.93■□□□□ 0.62
KRTCAP3Q53RY4 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18.93■□□□□ 0.62
KRTCAP3Q53RY4 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
KRTCAP3Q53RY4 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
KRTCAP3Q53RY4 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
KRTCAP3Q53RY4 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
KRTCAP3Q53RY4 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC18.93■□□□□ 0.62
KRTCAP3Q53RY4 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
KRTCAP3Q53RY4 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
KRTCAP3Q53RY4 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms