Protein–RNA interactions for Protein: Q53EL6

PDCD4, Programmed cell death protein 4, humanhuman

Known RBP Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4Q53EL6 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.27■□□□□ 0.84
PDCD4Q53EL6 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PDCD4Q53EL6 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.27■□□□□ 0.84
PDCD4Q53EL6 SERBP1P1-201ENST00000396021 1160 ntBASIC20.27■□□□□ 0.84
PDCD4Q53EL6 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.27■□□□□ 0.84
PDCD4Q53EL6 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
PDCD4Q53EL6 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.27■□□□□ 0.84
PDCD4Q53EL6 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PDCD4Q53EL6 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
PDCD4Q53EL6 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PDCD4Q53EL6 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
PDCD4Q53EL6 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
PDCD4Q53EL6 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
PDCD4Q53EL6 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
PDCD4Q53EL6 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.27■□□□□ 0.83
PDCD4Q53EL6 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.83
PDCD4Q53EL6 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PDCD4Q53EL6 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.26■□□□□ 0.83
PDCD4Q53EL6 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PDCD4Q53EL6 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
PDCD4Q53EL6 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PDCD4Q53EL6 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PDCD4Q53EL6 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.26■□□□□ 0.83
PDCD4Q53EL6 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PDCD4Q53EL6 AP006587.3-201ENST00000525742 1516 ntBASIC20.26■□□□□ 0.83
PDCD4Q53EL6 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
PDCD4Q53EL6 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PDCD4Q53EL6 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.26■□□□□ 0.83
PDCD4Q53EL6 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PDCD4Q53EL6 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PDCD4Q53EL6 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.25■□□□□ 0.83
PDCD4Q53EL6 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PDCD4Q53EL6 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
PDCD4Q53EL6 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.25■□□□□ 0.83
PDCD4Q53EL6 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.25■□□□□ 0.83
PDCD4Q53EL6 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.25■□□□□ 0.83
PDCD4Q53EL6 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC20.25■□□□□ 0.83
PDCD4Q53EL6 AC136469.2-201ENST00000623944 1028 ntBASIC20.25■□□□□ 0.83
PDCD4Q53EL6 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.25■□□□□ 0.83
PDCD4Q53EL6 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.25■□□□□ 0.83
PDCD4Q53EL6 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.25■□□□□ 0.83
PDCD4Q53EL6 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PDCD4Q53EL6 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
PDCD4Q53EL6 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PDCD4Q53EL6 SYT6-210ENST00000641643 1587 ntBASIC20.25■□□□□ 0.83
PDCD4Q53EL6 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PDCD4Q53EL6 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PDCD4Q53EL6 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.24■□□□□ 0.83
PDCD4Q53EL6 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PDCD4Q53EL6 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.24■□□□□ 0.83
PDCD4Q53EL6 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PDCD4Q53EL6 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.24■□□□□ 0.83
PDCD4Q53EL6 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC20.24■□□□□ 0.83
PDCD4Q53EL6 DUX4L19-201ENST00000557448 1267 ntBASIC20.24■□□□□ 0.83
PDCD4Q53EL6 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.24■□□□□ 0.83
PDCD4Q53EL6 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PDCD4Q53EL6 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PDCD4Q53EL6 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PDCD4Q53EL6 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.24■□□□□ 0.83
PDCD4Q53EL6 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PDCD4Q53EL6 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.24■□□□□ 0.83
PDCD4Q53EL6 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PDCD4Q53EL6 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.24■□□□□ 0.83
PDCD4Q53EL6 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.23■□□□□ 0.83
PDCD4Q53EL6 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PDCD4Q53EL6 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PDCD4Q53EL6 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PDCD4Q53EL6 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PDCD4Q53EL6 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
PDCD4Q53EL6 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PDCD4Q53EL6 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PDCD4Q53EL6 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PDCD4Q53EL6 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PDCD4Q53EL6 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PDCD4Q53EL6 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
PDCD4Q53EL6 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PDCD4Q53EL6 FEM1AP1-201ENST00000431297 1995 ntBASIC20.23■□□□□ 0.83
PDCD4Q53EL6 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PDCD4Q53EL6 SLC47A1P1-202ENST00000449666 945 ntBASIC20.23■□□□□ 0.83
PDCD4Q53EL6 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
PDCD4Q53EL6 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
PDCD4Q53EL6 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.23■□□□□ 0.83
PDCD4Q53EL6 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.23■□□□□ 0.83
PDCD4Q53EL6 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.23■□□□□ 0.83
PDCD4Q53EL6 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PDCD4Q53EL6 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PDCD4Q53EL6 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.23■□□□□ 0.83
PDCD4Q53EL6 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PDCD4Q53EL6 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
PDCD4Q53EL6 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PDCD4Q53EL6 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.22■□□□□ 0.83
PDCD4Q53EL6 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PDCD4Q53EL6 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
PDCD4Q53EL6 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC20.22■□□□□ 0.83
PDCD4Q53EL6 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.22■□□□□ 0.83
PDCD4Q53EL6 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.22■□□□□ 0.83
PDCD4Q53EL6 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
PDCD4Q53EL6 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PDCD4Q53EL6 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
PDCD4Q53EL6 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms