Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC18.07■□□□□ 0.48
EFNB3Q15768 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
EFNB3Q15768 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
EFNB3Q15768 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
EFNB3Q15768 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
EFNB3Q15768 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
EFNB3Q15768 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC18.06■□□□□ 0.48
EFNB3Q15768 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
EFNB3Q15768 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
EFNB3Q15768 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
EFNB3Q15768 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
EFNB3Q15768 AC007322.1-201ENST00000426983 750 ntBASIC18.06■□□□□ 0.48
EFNB3Q15768 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
EFNB3Q15768 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
EFNB3Q15768 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
EFNB3Q15768 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
EFNB3Q15768 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
EFNB3Q15768 PARP1-210ENST00000629232 477 ntTSL 5 BASIC18.06■□□□□ 0.48
EFNB3Q15768 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC18.06■□□□□ 0.48
EFNB3Q15768 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
EFNB3Q15768 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
EFNB3Q15768 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
EFNB3Q15768 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
EFNB3Q15768 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC18.05■□□□□ 0.48
EFNB3Q15768 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC18.05■□□□□ 0.48
EFNB3Q15768 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC18.05■□□□□ 0.48
EFNB3Q15768 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
EFNB3Q15768 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
EFNB3Q15768 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC18.05■□□□□ 0.48
EFNB3Q15768 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
EFNB3Q15768 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
EFNB3Q15768 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
EFNB3Q15768 AC003102.1-202ENST00000563394 1796 ntBASIC18.05■□□□□ 0.48
EFNB3Q15768 MIR663A-201ENST00000385250 93 ntBASIC18.05■□□□□ 0.48
EFNB3Q15768 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC18.05■□□□□ 0.48
EFNB3Q15768 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC18.05■□□□□ 0.48
EFNB3Q15768 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC18.05■□□□□ 0.48
EFNB3Q15768 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC18.05■□□□□ 0.48
EFNB3Q15768 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC18.05■□□□□ 0.48
EFNB3Q15768 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC18.05■□□□□ 0.48
EFNB3Q15768 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC18.05■□□□□ 0.48
EFNB3Q15768 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC18.05■□□□□ 0.48
EFNB3Q15768 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC18.05■□□□□ 0.48
EFNB3Q15768 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC18.05■□□□□ 0.48
EFNB3Q15768 GXYLT1P5-201ENST00000614548 1189 ntBASIC18.05■□□□□ 0.48
EFNB3Q15768 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
EFNB3Q15768 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
EFNB3Q15768 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC18.05■□□□□ 0.48
EFNB3Q15768 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC18.05■□□□□ 0.48
EFNB3Q15768 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC18.04■□□□□ 0.48
EFNB3Q15768 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
EFNB3Q15768 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
EFNB3Q15768 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
EFNB3Q15768 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
EFNB3Q15768 AC233723.2-201ENST00000623798 2106 ntBASIC18.04■□□□□ 0.48
EFNB3Q15768 HLA-L-209ENST00000420110 1011 ntBASIC18.04■□□□□ 0.48
EFNB3Q15768 NCF1B-203ENST00000435988 1254 ntBASIC18.04■□□□□ 0.48
EFNB3Q15768 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC18.04■□□□□ 0.48
EFNB3Q15768 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC18.04■□□□□ 0.48
EFNB3Q15768 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
EFNB3Q15768 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
EFNB3Q15768 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
EFNB3Q15768 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
EFNB3Q15768 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC18.03■□□□□ 0.48
EFNB3Q15768 MAP2K4P1-201ENST00000438453 1195 ntBASIC18.03■□□□□ 0.48
EFNB3Q15768 SLC7A5P2-201ENST00000553010 536 ntBASIC18.03■□□□□ 0.48
EFNB3Q15768 MAZ-216ENST00000616501 991 ntTSL 5 BASIC18.03■□□□□ 0.48
EFNB3Q15768 AC013268.1-206ENST00000638368 961 ntBASIC18.03■□□□□ 0.48
EFNB3Q15768 AC112229.1-201ENST00000639295 961 ntBASIC18.03■□□□□ 0.48
EFNB3Q15768 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
EFNB3Q15768 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
EFNB3Q15768 RARG-204ENST00000543726 1779 ntTSL 2 BASIC18.03■□□□□ 0.48
EFNB3Q15768 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
EFNB3Q15768 KRT16P2-201ENST00000414673 1423 ntBASIC18.03■□□□□ 0.48
EFNB3Q15768 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC18.03■□□□□ 0.48
EFNB3Q15768 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
EFNB3Q15768 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
EFNB3Q15768 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
EFNB3Q15768 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
EFNB3Q15768 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
EFNB3Q15768 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
EFNB3Q15768 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
EFNB3Q15768 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC18.02■□□□□ 0.48
EFNB3Q15768 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC18.02■□□□□ 0.48
EFNB3Q15768 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
EFNB3Q15768 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC18.02■□□□□ 0.48
EFNB3Q15768 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
EFNB3Q15768 CNN2P6-201ENST00000439038 900 ntBASIC18.02■□□□□ 0.48
EFNB3Q15768 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC18.02■□□□□ 0.48
EFNB3Q15768 TERF1P5-201ENST00000477545 1207 ntBASIC18.02■□□□□ 0.48
EFNB3Q15768 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC18.02■□□□□ 0.48
EFNB3Q15768 AC005181.1-201ENST00000604782 1256 ntBASIC18.02■□□□□ 0.48
EFNB3Q15768 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC18.02■□□□□ 0.48
EFNB3Q15768 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
EFNB3Q15768 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
EFNB3Q15768 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
EFNB3Q15768 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
EFNB3Q15768 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
EFNB3Q15768 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
EFNB3Q15768 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms