Protein–RNA interactions for Protein: Q12242

RUP1, UBA domain-containing protein RUP1, yeastyeast

Predictions only

Length 671 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RUP1Q12242 HAT1YPL001W 1125 nt3.16□□□□□ -1.9
RUP1Q12242 TOM1YDR457W 9807 nt3.16□□□□□ -1.9
RUP1Q12242 DYN1YKR054C 12279 nt3.16□□□□□ -1.9
RUP1Q12242 ARG2YJL071W 1725 nt3.16□□□□□ -1.9
RUP1Q12242 DOA4YDR069C 2781 nt3.15□□□□□ -1.9
RUP1Q12242 SEC27YGL137W 2670 nt3.15□□□□□ -1.91
RUP1Q12242 GCD2YGR083C 1956 nt3.15□□□□□ -1.91
RUP1Q12242 COBQ0105 1158 nt3.15□□□□□ -1.91
RUP1Q12242 MPS2YGL075C 1164 nt3.15□□□□□ -1.91
RUP1Q12242 RPL1BYGL135W 654 nt3.15□□□□□ -1.91
RUP1Q12242 YGL242CYGL242C 546 nt3.15□□□□□ -1.91
RUP1Q12242 PAU13YHL046C 363 nt3.15□□□□□ -1.91
RUP1Q12242 YKR070WYKR070W 1059 nt3.15□□□□□ -1.91
RUP1Q12242 NNT1YLR285W 786 nt3.15□□□□□ -1.91
RUP1Q12242 YLR339CYLR339C 552 nt3.15□□□□□ -1.91
RUP1Q12242 RPN13YLR421C 471 nt3.15□□□□□ -1.91
RUP1Q12242 TVP18YMR071C 504 nt3.15□□□□□ -1.91
RUP1Q12242 SEC14YMR079W 915 nt3.15□□□□□ -1.91
RUP1Q12242 DGA1YOR245C 1257 nt3.15□□□□□ -1.91
RUP1Q12242 RPL1AYPL220W 654 nt3.15□□□□□ -1.91
RUP1Q12242 SAD1YFR005C 1347 nt3.15□□□□□ -1.91
RUP1Q12242 RTG3YBL103C 1461 nt3.15□□□□□ -1.91
RUP1Q12242 HSE1YHL002W 1359 nt3.14□□□□□ -1.91
RUP1Q12242 RUB1YDR139C 234 nt3.14□□□□□ -1.91
RUP1Q12242 SMT3YDR510W 306 nt3.14□□□□□ -1.91
RUP1Q12242 RGI1YER067W 486 nt3.14□□□□□ -1.91
RUP1Q12242 SPT2YER161C 1002 nt3.14□□□□□ -1.91
RUP1Q12242 YLR169WYLR169W 354 nt3.14□□□□□ -1.91
RUP1Q12242 GPN3YLR243W 819 nt3.14□□□□□ -1.91
RUP1Q12242 YBL065WYBL065W 345 nt3.14□□□□□ -1.91
RUP1Q12242 END3YNL084C 1050 nt3.14□□□□□ -1.91
RUP1Q12242 SSE2YBR169C 2082 nt3.14□□□□□ -1.91
RUP1Q12242 PFK26YIL107C 2484 nt3.14□□□□□ -1.91
RUP1Q12242 SLY41YOR307C 1362 nt3.13□□□□□ -1.91
RUP1Q12242 CDC5YMR001C 2118 nt3.13□□□□□ -1.91
RUP1Q12242 PSP1YDR505C 2526 nt3.13□□□□□ -1.91
RUP1Q12242 THO1YER063W 657 nt3.13□□□□□ -1.91
RUP1Q12242 UPF3YGR072W 1164 nt3.13□□□□□ -1.91
RUP1Q12242 RPL24BYGR148C 468 nt3.13□□□□□ -1.91
RUP1Q12242 QCR10YHR001W-A 234 nt3.13□□□□□ -1.91
RUP1Q12242 IME1YJR094C 1083 nt3.13□□□□□ -1.91
RUP1Q12242 YAL066WYAL066W 309 nt3.13□□□□□ -1.91
RUP1Q12242 DLT1YMR126C 1029 nt3.13□□□□□ -1.91
RUP1Q12242 YNL319WYNL319W 441 nt3.13□□□□□ -1.91
RUP1Q12242 HHF1YBR009C 312 nt3.13□□□□□ -1.91
RUP1Q12242 SFG1YOR315W 1041 nt3.13□□□□□ -1.91
RUP1Q12242 DNM1YLL001W 2274 nt3.13□□□□□ -1.91
RUP1Q12242 ITT1YML068W 1395 nt3.12□□□□□ -1.91
RUP1Q12242 OPI6YDL096C 327 nt3.12□□□□□ -1.91
RUP1Q12242 SRB7YDR308C 423 nt3.12□□□□□ -1.91
RUP1Q12242 tK(UUU)DtK(UUU)D 73 nt3.12□□□□□ -1.91
RUP1Q12242 tK(UUU)G1tK(UUU)G1 73 nt3.12□□□□□ -1.91
RUP1Q12242 tK(UUU)G2tK(UUU)G2 73 nt3.12□□□□□ -1.91
RUP1Q12242 tK(UUU)KtK(UUU)K 73 nt3.12□□□□□ -1.91
RUP1Q12242 tK(UUU)LtK(UUU)L 73 nt3.12□□□□□ -1.91
RUP1Q12242 tK(UUU)OtK(UUU)O 73 nt3.12□□□□□ -1.91
RUP1Q12242 tK(UUU)PtK(UUU)P 73 nt3.12□□□□□ -1.91
RUP1Q12242 CWC23YGL128C 852 nt3.12□□□□□ -1.91
RUP1Q12242 YMR158C-AYMR158C-A 138 nt3.12□□□□□ -1.91
RUP1Q12242 YNL226WYNL226W 411 nt3.12□□□□□ -1.91
RUP1Q12242 BUD21YOR078W 645 nt3.12□□□□□ -1.91
RUP1Q12242 RPA43YOR340C 981 nt3.12□□□□□ -1.91
RUP1Q12242 JJJ1YNL227C 1773 nt3.12□□□□□ -1.91
RUP1Q12242 SKN7YHR206W 1869 nt3.11□□□□□ -1.91
RUP1Q12242 VPS17YOR132W 1656 nt3.11□□□□□ -1.91
RUP1Q12242 SEC7YDR170C 6030 nt3.11□□□□□ -1.91
RUP1Q12242 RCY1YJL204C 2523 nt3.11□□□□□ -1.91
RUP1Q12242 YDR491CYDR491C 492 nt3.11□□□□□ -1.91
RUP1Q12242 YEL075CYEL075C 369 nt3.11□□□□□ -1.91
RUP1Q12242 YFR057WYFR057W 456 nt3.11□□□□□ -1.91
RUP1Q12242 OST5YGL226C-A 261 nt3.11□□□□□ -1.91
RUP1Q12242 YKL156C-AYKL156C-A 117 nt3.11□□□□□ -1.91
RUP1Q12242 RPC37YKR025W 849 nt3.11□□□□□ -1.91
RUP1Q12242 BET5YML077W 480 nt3.11□□□□□ -1.91
RUP1Q12242 POL30YBR088C 777 nt3.11□□□□□ -1.91
RUP1Q12242 YPS6YIR039C 1614 nt3.11□□□□□ -1.91
RUP1Q12242 VPS9YML097C 1356 nt3.11□□□□□ -1.91
RUP1Q12242 DPP1YDR284C 870 nt3.1□□□□□ -1.91
RUP1Q12242 MFA1YDR461W 111 nt3.1□□□□□ -1.91
RUP1Q12242 SMX2YFL017W-A 234 nt3.1□□□□□ -1.91
RUP1Q12242 YGR039WYGR039W 312 nt3.1□□□□□ -1.91
RUP1Q12242 MTM1YGR257C 1101 nt3.1□□□□□ -1.91
RUP1Q12242 SVP26YHR181W 687 nt3.1□□□□□ -1.91
RUP1Q12242 NNF1YJR112W 606 nt3.1□□□□□ -1.91
RUP1Q12242 YLR400WYLR400W 474 nt3.1□□□□□ -1.91
RUP1Q12242 YLR416CYLR416C 399 nt3.1□□□□□ -1.91
RUP1Q12242 snR11snR11 258 nt3.1□□□□□ -1.91
RUP1Q12242 MCA1YOR197W 1299 nt3.1□□□□□ -1.91
RUP1Q12242 TUM1YOR251C 915 nt3.1□□□□□ -1.91
RUP1Q12242 BTS1YPL069C 1008 nt3.1□□□□□ -1.91
RUP1Q12242 YPR053CYPR053C 456 nt3.1□□□□□ -1.91
RUP1Q12242 UBP14YBR058C 2346 nt3.1□□□□□ -1.91
RUP1Q12242 YGL176CYGL176C 1665 nt3.1□□□□□ -1.91
RUP1Q12242 SPO71YDR104C 3738 nt3.1□□□□□ -1.91
RUP1Q12242 SEC15YGL233W 2733 nt3.1□□□□□ -1.91
RUP1Q12242 CDH1YGL003C 1701 nt3.1□□□□□ -1.91
RUP1Q12242 ARF1YDL192W 546 nt3.09□□□□□ -1.91
RUP1Q12242 YDR090CYDR090C 933 nt3.09□□□□□ -1.91
RUP1Q12242 GCD6YDR211W 2139 nt3.09□□□□□ -1.91
RUP1Q12242 AIM11YER093C-A 414 nt3.09□□□□□ -1.91
Retrieved 100 of 7,029 protein–RNA pairs in 24.8 ms