Protein–RNA interactions for Protein: Q08387

DNL4, DNA ligase 4, yeastyeast

Predicted RBP Predictions only

Length 944 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
DNL4Q08387 VTC4YJL012C 2166 nt3.18□□□□□ -1.9
DNL4Q08387 TFC1YBR123C 1950 nt3.18□□□□□ -1.9
DNL4Q08387 ARP4YJL081C 1470 nt3.17□□□□□ -1.9
DNL4Q08387 NHP10YDL002C 612 nt3.17□□□□□ -1.9
DNL4Q08387 RPL23BYER117W 414 nt3.17□□□□□ -1.9
DNL4Q08387 YKL162CYKL162C 1209 nt3.17□□□□□ -1.9
DNL4Q08387 GSP1YLR293C 660 nt3.17□□□□□ -1.9
DNL4Q08387 PNO1YOR145C 825 nt3.17□□□□□ -1.9
DNL4Q08387 YOR238WYOR238W 912 nt3.17□□□□□ -1.9
DNL4Q08387 ATG5YPL149W 885 nt3.17□□□□□ -1.9
DNL4Q08387 SLM4YBR077C 489 nt3.17□□□□□ -1.9
DNL4Q08387 MIP6YHR015W 1980 nt3.17□□□□□ -1.9
DNL4Q08387 EBS1YDR206W 2655 nt3.17□□□□□ -1.9
DNL4Q08387 SPO14YKR031C 5052 nt3.17□□□□□ -1.9
DNL4Q08387 MAK11YKL021C 1407 nt3.17□□□□□ -1.9
DNL4Q08387 SLS1YLR139C 1932 nt3.17□□□□□ -1.9
DNL4Q08387 YDL199CYDL199C 2064 nt3.16□□□□□ -1.9
DNL4Q08387 RAX2YLR084C 3663 nt3.16□□□□□ -1.9
DNL4Q08387 YPP1YGR198W 2454 nt3.16□□□□□ -1.9
DNL4Q08387 NDT80YHR124W 1884 nt3.16□□□□□ -1.9
DNL4Q08387 PEX10YDR265W 1014 nt3.16□□□□□ -1.9
DNL4Q08387 HMF1YER057C 390 nt3.16□□□□□ -1.9
DNL4Q08387 MPS2YGL075C 1164 nt3.16□□□□□ -1.9
DNL4Q08387 SCM4YGR049W 564 nt3.16□□□□□ -1.9
DNL4Q08387 CUP1-1YHR053C 186 nt3.16□□□□□ -1.9
DNL4Q08387 CUP1-2YHR055C 186 nt3.16□□□□□ -1.9
DNL4Q08387 YIL156W-AYIL156W-A 402 nt3.16□□□□□ -1.9
DNL4Q08387 PML39YML107C 1005 nt3.16□□□□□ -1.9
DNL4Q08387 YNL035CYNL035C 1170 nt3.16□□□□□ -1.9
DNL4Q08387 PEX11YOL147C 711 nt3.16□□□□□ -1.9
DNL4Q08387 UFE1YOR075W 1041 nt3.16□□□□□ -1.9
DNL4Q08387 YBR292CYBR292C 372 nt3.16□□□□□ -1.9
DNL4Q08387 APA1YCL050C 966 nt3.16□□□□□ -1.9
DNL4Q08387 ROG1YGL144C 2058 nt3.16□□□□□ -1.9
DNL4Q08387 MDM1YML104C 3384 nt3.16□□□□□ -1.9
DNL4Q08387 DET1YDR051C 1005 nt3.15□□□□□ -1.91
DNL4Q08387 SPT15YER148W 723 nt3.15□□□□□ -1.91
DNL4Q08387 CGR1YGL029W 363 nt3.15□□□□□ -1.91
DNL4Q08387 LIF1YGL090W 1266 nt3.15□□□□□ -1.91
DNL4Q08387 CMC1YKL137W 336 nt3.15□□□□□ -1.91
DNL4Q08387 YMR141CYMR141C 309 nt3.15□□□□□ -1.91
DNL4Q08387 ATG34YOL083W 1239 nt3.15□□□□□ -1.91
DNL4Q08387 YBR013CYBR013C 390 nt3.15□□□□□ -1.91
DNL4Q08387 THI80YOR143C 960 nt3.15□□□□□ -1.91
DNL4Q08387 MRPL27YBR282W 441 nt3.15□□□□□ -1.91
DNL4Q08387 TIF4631YGR162W 2859 nt3.15□□□□□ -1.91
DNL4Q08387 MSM1YGR171C 1728 nt3.15□□□□□ -1.91
DNL4Q08387 TLC1TLC1 1301 nt3.15□□□□□ -1.91
DNL4Q08387 ATP25YMR098C 1839 nt3.14□□□□□ -1.91
DNL4Q08387 SRB8YCR081W 4284 nt3.14□□□□□ -1.91
DNL4Q08387 VMA8YEL051W 771 nt3.14□□□□□ -1.91
DNL4Q08387 SPT2YER161C 1002 nt3.14□□□□□ -1.91
DNL4Q08387 Q0144Q0144 330 nt3.14□□□□□ -1.91
DNL4Q08387 YGR270C-AYGR270C-A 219 nt3.14□□□□□ -1.91
DNL4Q08387 YGR283CYGR283C 1026 nt3.14□□□□□ -1.91
DNL4Q08387 THP2YHR167W 786 nt3.14□□□□□ -1.91
DNL4Q08387 CFD1YIL003W 882 nt3.14□□□□□ -1.91
DNL4Q08387 COQ9YLR201C 783 nt3.14□□□□□ -1.91
DNL4Q08387 YBL029C-AYBL029C-A 285 nt3.14□□□□□ -1.91
DNL4Q08387 FYV6YNL133C 522 nt3.14□□□□□ -1.91
DNL4Q08387 SYC1YOR179C 567 nt3.14□□□□□ -1.91
DNL4Q08387 IRC13YOR235W 315 nt3.14□□□□□ -1.91
DNL4Q08387 PIN3YPR154W 648 nt3.14□□□□□ -1.91
DNL4Q08387 SRC1YML034W 2505 nt3.14□□□□□ -1.91
DNL4Q08387 LCB4YOR171C 1875 nt3.13□□□□□ -1.91
DNL4Q08387 STE24YJR117W 1362 nt3.13□□□□□ -1.91
DNL4Q08387 DRS2YAL026C 4068 nt3.13□□□□□ -1.91
DNL4Q08387 FLO1YAR050W 4614 nt3.13□□□□□ -1.91
DNL4Q08387 FIP1YJR093C 984 nt3.13□□□□□ -1.91
DNL4Q08387 RPC37YKR025W 849 nt3.13□□□□□ -1.91
DNL4Q08387 YAL066WYAL066W 309 nt3.13□□□□□ -1.91
DNL4Q08387 BOS1YLR078C 735 nt3.13□□□□□ -1.91
DNL4Q08387 YOR331CYOR331C 558 nt3.13□□□□□ -1.91
DNL4Q08387 HAT1YPL001W 1125 nt3.13□□□□□ -1.91
DNL4Q08387 ECM21YBL101C 3354 nt3.13□□□□□ -1.91
DNL4Q08387 EMP70YLR083C 2004 nt3.12□□□□□ -1.91
DNL4Q08387 PMI40YER003C 1290 nt3.12□□□□□ -1.91
DNL4Q08387 RPL1BYGL135W 654 nt3.12□□□□□ -1.91
DNL4Q08387 PRP18YGR006W 756 nt3.12□□□□□ -1.91
DNL4Q08387 YHL005CYHL005C 393 nt3.12□□□□□ -1.91
DNL4Q08387 HTD2YHR067W 843 nt3.12□□□□□ -1.91
DNL4Q08387 PPX1YHR201C 1194 nt3.12□□□□□ -1.91
DNL4Q08387 YLR416CYLR416C 399 nt3.12□□□□□ -1.91
DNL4Q08387 RPL13BYMR142C 600 nt3.12□□□□□ -1.91
DNL4Q08387 RPL1AYPL220W 654 nt3.12□□□□□ -1.91
DNL4Q08387 ICS2YBR157C 768 nt3.12□□□□□ -1.91
DNL4Q08387 MON1YGL124C 1935 nt3.12□□□□□ -1.91
DNL4Q08387 HSE1YHL002W 1359 nt3.12□□□□□ -1.91
DNL4Q08387 YGR237CYGR237C 2358 nt3.11□□□□□ -1.91
DNL4Q08387 VPS17YOR132W 1656 nt3.11□□□□□ -1.91
DNL4Q08387 HUL5YGL141W 2733 nt3.11□□□□□ -1.91
DNL4Q08387 ORC1YML065W 2745 nt3.11□□□□□ -1.91
DNL4Q08387 YGL006W-AYGL006W-A 111 nt3.11□□□□□ -1.91
DNL4Q08387 DOG1YHR044C 741 nt3.11□□□□□ -1.91
DNL4Q08387 EPT1YHR123W 1176 nt3.11□□□□□ -1.91
DNL4Q08387 YIR023C-AYIR023C-A 324 nt3.11□□□□□ -1.91
DNL4Q08387 EMC2YJR088C 879 nt3.11□□□□□ -1.91
DNL4Q08387 SMD3YLR147C 306 nt3.11□□□□□ -1.91
DNL4Q08387 PRE8YML092C 753 nt3.11□□□□□ -1.91
DNL4Q08387 YMR294W-AYMR294W-A 360 nt3.11□□□□□ -1.91
Retrieved 100 of 7,029 protein–RNA pairs in 18.3 ms