Protein–RNA interactions for Protein: Q07878

VPS13, Vacuolar protein sorting-associated protein 13, yeastyeast

Predictions only

Length 3,144 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS13Q07878 NDT80YHR124W 1884 nt1.73□□□□□ -2.13
VPS13Q07878 YLL047WYLL047W 384 nt1.72□□□□□ -2.13
VPS13Q07878 TRI1YMR233W 681 nt1.72□□□□□ -2.13
VPS13Q07878 FPK1YNR047W 2682 nt1.72□□□□□ -2.13
VPS13Q07878 SAS2YMR127C 1017 nt1.71□□□□□ -2.14
VPS13Q07878 GRX3YDR098C 858 nt1.71□□□□□ -2.14
VPS13Q07878 YOR019WYOR019W 2193 nt1.71□□□□□ -2.14
VPS13Q07878 RPO21YDL140C 5202 nt1.71□□□□□ -2.14
VPS13Q07878 REV1YOR346W 2958 nt1.71□□□□□ -2.14
VPS13Q07878 YJL028WYJL028W 336 nt1.71□□□□□ -2.14
VPS13Q07878 AML1YGR001C 747 nt1.7□□□□□ -2.14
VPS13Q07878 YMR321CYMR321C 318 nt1.7□□□□□ -2.14
VPS13Q07878 MRE11YMR224C 2079 nt1.7□□□□□ -2.14
VPS13Q07878 SSK2YNR031C 4740 nt1.7□□□□□ -2.14
VPS13Q07878 SPP382YLR424W 2127 nt1.7□□□□□ -2.14
VPS13Q07878 STP4YDL048C 1473 nt1.7□□□□□ -2.14
VPS13Q07878 ESL2YKR096W 3588 nt1.7□□□□□ -2.14
VPS13Q07878 YNL235CYNL235C 432 nt1.69□□□□□ -2.14
VPS13Q07878 SKI3YPR189W 4299 nt1.69□□□□□ -2.14
VPS13Q07878 SPF1YEL031W 3648 nt1.69□□□□□ -2.14
VPS13Q07878 GRX1YCL035C 333 nt1.69□□□□□ -2.14
VPS13Q07878 CFT1YDR301W 4074 nt1.69□□□□□ -2.14
VPS13Q07878 BEM2YER155C 6504 nt1.69□□□□□ -2.14
VPS13Q07878 YDL118WYDL118W 381 nt1.69□□□□□ -2.14
VPS13Q07878 PDP3YLR455W 915 nt1.69□□□□□ -2.14
VPS13Q07878 OSW5YMR148W 447 nt1.69□□□□□ -2.14
VPS13Q07878 APN2YBL019W 1563 nt1.68□□□□□ -2.14
VPS13Q07878 YJR023CYJR023C 402 nt1.68□□□□□ -2.14
VPS13Q07878 RPS1AYLR441C 768 nt1.68□□□□□ -2.14
VPS13Q07878 ARF3YOR094W 552 nt1.68□□□□□ -2.14
VPS13Q07878 BTS1YPL069C 1008 nt1.68□□□□□ -2.14
VPS13Q07878 PSD2YGR170W 3417 nt1.67□□□□□ -2.14
VPS13Q07878 HMO1YDR174W 741 nt1.67□□□□□ -2.14
VPS13Q07878 YIL059CYIL059C 366 nt1.67□□□□□ -2.14
VPS13Q07878 YML090WYML090W 387 nt1.67□□□□□ -2.14
VPS13Q07878 IRC21YMR073C 606 nt1.67□□□□□ -2.14
VPS13Q07878 WTM2YOR229W 1404 nt1.67□□□□□ -2.14
VPS13Q07878 TEL1YBL088C 8364 nt1.67□□□□□ -2.14
VPS13Q07878 tH(GUG)E1tH(GUG)E1 72 nt1.66□□□□□ -2.14
VPS13Q07878 tH(GUG)E2tH(GUG)E2 72 nt1.66□□□□□ -2.14
VPS13Q07878 tH(GUG)G1tH(GUG)G1 72 nt1.66□□□□□ -2.14
VPS13Q07878 tH(GUG)G2tH(GUG)G2 72 nt1.66□□□□□ -2.14
VPS13Q07878 tH(GUG)HtH(GUG)H 72 nt1.66□□□□□ -2.14
VPS13Q07878 tH(GUG)KtH(GUG)K 72 nt1.66□□□□□ -2.14
VPS13Q07878 tH(GUG)MtH(GUG)M 72 nt1.66□□□□□ -2.14
VPS13Q07878 NSP1YJL041W 2472 nt1.66□□□□□ -2.14
VPS13Q07878 ELP3YPL086C 1674 nt1.66□□□□□ -2.14
VPS13Q07878 BOI1YBL085W 2943 nt1.66□□□□□ -2.14
VPS13Q07878 UTP8YGR128C 2142 nt1.66□□□□□ -2.14
VPS13Q07878 ELG1YOR144C 2376 nt1.66□□□□□ -2.14
VPS13Q07878 CYR1YJL005W 6081 nt1.66□□□□□ -2.14
VPS13Q07878 MSH6YDR097C 3729 nt1.66□□□□□ -2.14
VPS13Q07878 PIB1YDR313C 861 nt1.66□□□□□ -2.14
VPS13Q07878 MSL1YIR009W 336 nt1.66□□□□□ -2.14
VPS13Q07878 MRPS17YMR188C 714 nt1.66□□□□□ -2.14
VPS13Q07878 HSP10YOR020C 321 nt1.66□□□□□ -2.14
VPS13Q07878 MIX14YDR031W 366 nt1.65□□□□□ -2.14
VPS13Q07878 YGL117WYGL117W 798 nt1.65□□□□□ -2.14
VPS13Q07878 YBL012CYBL012C 402 nt1.65□□□□□ -2.14
VPS13Q07878 NIC96YFR002W 2520 nt1.65□□□□□ -2.14
VPS13Q07878 TRM732YMR259C 4263 nt1.65□□□□□ -2.15
VPS13Q07878 DYN1YKR054C 12279 nt1.65□□□□□ -2.15
VPS13Q07878 FLO1YAR050W 4614 nt1.65□□□□□ -2.15
VPS13Q07878 YFH1YDL120W 525 nt1.65□□□□□ -2.15
VPS13Q07878 YER068C-AYER068C-A 432 nt1.64□□□□□ -2.15
VPS13Q07878 SNL1YIL016W 480 nt1.64□□□□□ -2.15
VPS13Q07878 SRB8YCR081W 4284 nt1.64□□□□□ -2.15
VPS13Q07878 MDM20YOL076W 2391 nt1.64□□□□□ -2.15
VPS13Q07878 SHE9YDR393W 1371 nt1.64□□□□□ -2.15
VPS13Q07878 CAT8YMR280C 4302 nt1.64□□□□□ -2.15
VPS13Q07878 YOL014WYOL014W 375 nt1.64□□□□□ -2.15
VPS13Q07878 MUD1YBR119W 897 nt1.64□□□□□ -2.15
VPS13Q07878 VPH1YOR270C 2523 nt1.64□□□□□ -2.15
VPS13Q07878 SBE22YHR103W 2559 nt1.64□□□□□ -2.15
VPS13Q07878 GPM2YDL021W 936 nt1.64□□□□□ -2.15
VPS13Q07878 MMM1YLL006W 1281 nt1.64□□□□□ -2.15
VPS13Q07878 YML003WYML003W 873 nt1.64□□□□□ -2.15
VPS13Q07878 PKR1YMR123W 369 nt1.64□□□□□ -2.15
VPS13Q07878 YKL075CYKL075C 1353 nt1.63□□□□□ -2.15
VPS13Q07878 IOC3YFR013W 2364 nt1.63□□□□□ -2.15
VPS13Q07878 RSN1YMR266W 2862 nt1.63□□□□□ -2.15
VPS13Q07878 CBS2YDR197W 1170 nt1.63□□□□□ -2.15
VPS13Q07878 PEX21YGR239C 867 nt1.63□□□□□ -2.15
VPS13Q07878 ATG34YOL083W 1239 nt1.63□□□□□ -2.15
VPS13Q07878 YDR115WYDR115W 318 nt1.63□□□□□ -2.15
VPS13Q07878 HHF2YNL030W 312 nt1.63□□□□□ -2.15
VPS13Q07878 YBL065WYBL065W 345 nt1.63□□□□□ -2.15
VPS13Q07878 YJR003CYJR003C 1560 nt1.63□□□□□ -2.15
VPS13Q07878 YNL144CYNL144C 2223 nt1.62□□□□□ -2.15
VPS13Q07878 ZRG17YNR039C 1818 nt1.62□□□□□ -2.15
VPS13Q07878 MLP1YKR095W 5628 nt1.62□□□□□ -2.15
VPS13Q07878 ARD1YHR013C 717 nt1.62□□□□□ -2.15
VPS13Q07878 MYO3YKL129C 3819 nt1.61□□□□□ -2.15
VPS13Q07878 NAT1YDL040C 2565 nt1.61□□□□□ -2.15
VPS13Q07878 PET123YOR158W 957 nt1.61□□□□□ -2.15
VPS13Q07878 SMC4YLR086W 4257 nt1.61□□□□□ -2.15
VPS13Q07878 MSH5YDL154W 2706 nt1.61□□□□□ -2.15
VPS13Q07878 HRI1YLR301W 735 nt1.6□□□□□ -2.15
VPS13Q07878 YOL162WYOL162W 648 nt1.6□□□□□ -2.15
VPS13Q07878 JID1YPR061C 906 nt1.6□□□□□ -2.15
Retrieved 100 of 7,029 protein–RNA pairs in 143.1 ms