Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC21.28■■□□□ 1
PRAMEP78395 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC21.28■■□□□ 1
PRAMEP78395 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC21.28■■□□□ 1
PRAMEP78395 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC21.27■■□□□ 1
PRAMEP78395 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC21.27■■□□□ 1
PRAMEP78395 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
PRAMEP78395 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PRAMEP78395 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PRAMEP78395 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
PRAMEP78395 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
PRAMEP78395 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PRAMEP78395 HYI-206ENST00000372434 1025 ntTSL 5 BASIC21.27■■□□□ 1
PRAMEP78395 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PRAMEP78395 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC21.27■■□□□ 1
PRAMEP78395 AL137060.1-201ENST00000618151 2648 ntBASIC21.27■■□□□ 1
PRAMEP78395 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC21.27■■□□□ 1
PRAMEP78395 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PRAMEP78395 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
PRAMEP78395 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PRAMEP78395 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PRAMEP78395 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PRAMEP78395 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC21.26■□□□□ 0.99
PRAMEP78395 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PRAMEP78395 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC21.26■□□□□ 0.99
PRAMEP78395 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PRAMEP78395 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC21.26■□□□□ 0.99
PRAMEP78395 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC21.26■□□□□ 0.99
PRAMEP78395 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PRAMEP78395 MPST-204ENST00000404393 1329 ntTSL 5 BASIC21.26■□□□□ 0.99
PRAMEP78395 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC21.26■□□□□ 0.99
PRAMEP78395 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PRAMEP78395 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PRAMEP78395 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PRAMEP78395 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC21.25■□□□□ 0.99
PRAMEP78395 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PRAMEP78395 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PRAMEP78395 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PRAMEP78395 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PRAMEP78395 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PRAMEP78395 MIR638-201ENST00000385237 100 ntBASIC21.25■□□□□ 0.99
PRAMEP78395 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PRAMEP78395 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC21.25■□□□□ 0.99
PRAMEP78395 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC21.25■□□□□ 0.99
PRAMEP78395 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC21.25■□□□□ 0.99
PRAMEP78395 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC21.25■□□□□ 0.99
PRAMEP78395 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC21.25■□□□□ 0.99
PRAMEP78395 AC012414.1-201ENST00000556676 535 ntBASIC21.25■□□□□ 0.99
PRAMEP78395 AL354811.1-201ENST00000610286 706 ntBASIC21.25■□□□□ 0.99
PRAMEP78395 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
PRAMEP78395 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PRAMEP78395 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
PRAMEP78395 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC21.25■□□□□ 0.99
PRAMEP78395 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PRAMEP78395 AC005224.4-201ENST00000583262 1652 ntBASIC21.24■□□□□ 0.99
PRAMEP78395 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PRAMEP78395 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC21.24■□□□□ 0.99
PRAMEP78395 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC21.24■□□□□ 0.99
PRAMEP78395 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC21.24■□□□□ 0.99
PRAMEP78395 STOX2-205ENST00000513034 807 ntTSL 3 BASIC21.24■□□□□ 0.99
PRAMEP78395 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PRAMEP78395 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC21.24■□□□□ 0.99
PRAMEP78395 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PRAMEP78395 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC21.24■□□□□ 0.99
PRAMEP78395 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
PRAMEP78395 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
PRAMEP78395 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC21.23■□□□□ 0.99
PRAMEP78395 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC21.23■□□□□ 0.99
PRAMEP78395 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PRAMEP78395 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PRAMEP78395 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PRAMEP78395 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC21.23■□□□□ 0.99
PRAMEP78395 AC105265.2-201ENST00000467189 838 ntBASIC21.23■□□□□ 0.99
PRAMEP78395 RHOF-204ENST00000537265 699 ntTSL 2 BASIC21.23■□□□□ 0.99
PRAMEP78395 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC21.23■□□□□ 0.99
PRAMEP78395 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PRAMEP78395 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC21.23■□□□□ 0.99
PRAMEP78395 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PRAMEP78395 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
PRAMEP78395 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PRAMEP78395 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC21.23■□□□□ 0.99
PRAMEP78395 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PRAMEP78395 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC21.22■□□□□ 0.99
PRAMEP78395 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PRAMEP78395 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PRAMEP78395 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PRAMEP78395 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC21.22■□□□□ 0.99
PRAMEP78395 AL358852.1-201ENST00000623174 1268 ntBASIC21.22■□□□□ 0.99
PRAMEP78395 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.22■□□□□ 0.99
PRAMEP78395 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
PRAMEP78395 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PRAMEP78395 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PRAMEP78395 AC055733.4-201ENST00000638462 1354 ntBASIC21.22■□□□□ 0.99
PRAMEP78395 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC21.21■□□□□ 0.99
PRAMEP78395 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PRAMEP78395 NME4-202ENST00000382940 766 ntTSL 3 BASIC21.21■□□□□ 0.99
PRAMEP78395 FXN-202ENST00000396364 980 ntTSL 5 BASIC21.21■□□□□ 0.99
PRAMEP78395 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC21.21■□□□□ 0.99
PRAMEP78395 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC21.21■□□□□ 0.99
PRAMEP78395 NME4-211ENST00000620944 1193 ntTSL 2 BASIC21.21■□□□□ 0.99
PRAMEP78395 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms