Protein–RNA interactions for Protein: P78324

SIRPA, Tyrosine-protein phosphatase non-receptor type substrate 1, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPAP78324 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SIRPAP78324 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC19.25■□□□□ 0.67
SIRPAP78324 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SIRPAP78324 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.25■□□□□ 0.67
SIRPAP78324 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SIRPAP78324 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SIRPAP78324 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SIRPAP78324 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SIRPAP78324 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
SIRPAP78324 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
SIRPAP78324 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC19.24■□□□□ 0.67
SIRPAP78324 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SIRPAP78324 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.24■□□□□ 0.67
SIRPAP78324 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC19.24■□□□□ 0.67
SIRPAP78324 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SIRPAP78324 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SIRPAP78324 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SIRPAP78324 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SIRPAP78324 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SIRPAP78324 AC244015.2-201ENST00000616358 1861 ntBASIC19.23■□□□□ 0.67
SIRPAP78324 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
SIRPAP78324 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SIRPAP78324 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.23■□□□□ 0.67
SIRPAP78324 TPRG1LP1-201ENST00000598702 760 ntBASIC19.23■□□□□ 0.67
SIRPAP78324 IKBKGP1-201ENST00000612193 1073 ntBASIC19.23■□□□□ 0.67
SIRPAP78324 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
SIRPAP78324 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SIRPAP78324 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SIRPAP78324 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
SIRPAP78324 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SIRPAP78324 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.22■□□□□ 0.67
SIRPAP78324 ASL-203ENST00000380839 1765 ntTSL 5 BASIC19.22■□□□□ 0.67
SIRPAP78324 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.22■□□□□ 0.67
SIRPAP78324 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
SIRPAP78324 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SIRPAP78324 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.22■□□□□ 0.67
SIRPAP78324 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
SIRPAP78324 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SIRPAP78324 AC022517.1-201ENST00000592429 346 ntBASIC19.22■□□□□ 0.67
SIRPAP78324 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SIRPAP78324 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SIRPAP78324 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SIRPAP78324 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SIRPAP78324 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
SIRPAP78324 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SIRPAP78324 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SIRPAP78324 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SIRPAP78324 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.22■□□□□ 0.67
SIRPAP78324 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
SIRPAP78324 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SIRPAP78324 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
SIRPAP78324 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SIRPAP78324 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.21■□□□□ 0.67
SIRPAP78324 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC19.21■□□□□ 0.67
SIRPAP78324 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SIRPAP78324 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SIRPAP78324 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SIRPAP78324 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SIRPAP78324 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SIRPAP78324 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
SIRPAP78324 GOLGA2P6-201ENST00000340929 2049 ntBASIC19.21■□□□□ 0.67
SIRPAP78324 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
SIRPAP78324 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SIRPAP78324 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
SIRPAP78324 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.21■□□□□ 0.67
SIRPAP78324 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC19.21■□□□□ 0.67
SIRPAP78324 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
SIRPAP78324 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SIRPAP78324 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
SIRPAP78324 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SIRPAP78324 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SIRPAP78324 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SIRPAP78324 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SIRPAP78324 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
SIRPAP78324 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SIRPAP78324 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SIRPAP78324 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.2■□□□□ 0.66
SIRPAP78324 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SIRPAP78324 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC19.2■□□□□ 0.66
SIRPAP78324 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC19.2■□□□□ 0.66
SIRPAP78324 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SIRPAP78324 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SIRPAP78324 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
SIRPAP78324 AC005229.4-201ENST00000610085 2198 ntBASIC19.2■□□□□ 0.66
SIRPAP78324 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.2■□□□□ 0.66
SIRPAP78324 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.2■□□□□ 0.66
SIRPAP78324 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SIRPAP78324 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SIRPAP78324 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SIRPAP78324 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
SIRPAP78324 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
SIRPAP78324 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SIRPAP78324 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
SIRPAP78324 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SIRPAP78324 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SIRPAP78324 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SIRPAP78324 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SIRPAP78324 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SIRPAP78324 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SIRPAP78324 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms