Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
RPL39P62891 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC14.91□□□□□ -0.02
RPL39P62891 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RPL39P62891 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RPL39P62891 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC14.91□□□□□ -0.02
RPL39P62891 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
RPL39P62891 AL031602.1-201ENST00000633169 911 ntBASIC14.91□□□□□ -0.02
RPL39P62891 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC14.91□□□□□ -0.02
RPL39P62891 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
RPL39P62891 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC14.91□□□□□ -0.02
RPL39P62891 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RPL39P62891 USP45-205ENST00000472914 1617 ntTSL 5 BASIC14.91□□□□□ -0.02
RPL39P62891 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RPL39P62891 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
RPL39P62891 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
RPL39P62891 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
RPL39P62891 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
RPL39P62891 ME2-216ENST00000639850 2331 ntTSL 5 BASIC14.91□□□□□ -0.02
RPL39P62891 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RPL39P62891 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
RPL39P62891 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RPL39P62891 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
RPL39P62891 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RPL39P62891 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC14.9□□□□□ -0.02
RPL39P62891 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RPL39P62891 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC14.9□□□□□ -0.02
RPL39P62891 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
RPL39P62891 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
RPL39P62891 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC14.9□□□□□ -0.02
RPL39P62891 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC14.9□□□□□ -0.02
RPL39P62891 AL031848.2-201ENST00000607670 837 ntBASIC14.9□□□□□ -0.02
RPL39P62891 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RPL39P62891 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RPL39P62891 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RPL39P62891 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RPL39P62891 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RPL39P62891 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC14.9□□□□□ -0.02
RPL39P62891 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RPL39P62891 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
RPL39P62891 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC14.89□□□□□ -0.03
RPL39P62891 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RPL39P62891 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC14.89□□□□□ -0.03
RPL39P62891 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
RPL39P62891 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RPL39P62891 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RPL39P62891 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RPL39P62891 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC14.89□□□□□ -0.03
RPL39P62891 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
RPL39P62891 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC14.89□□□□□ -0.03
RPL39P62891 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RPL39P62891 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RPL39P62891 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RPL39P62891 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC14.89□□□□□ -0.03
RPL39P62891 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
RPL39P62891 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RPL39P62891 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RPL39P62891 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
RPL39P62891 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RPL39P62891 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC14.89□□□□□ -0.03
RPL39P62891 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RPL39P62891 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
RPL39P62891 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC14.88□□□□□ -0.03
RPL39P62891 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RPL39P62891 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC14.88□□□□□ -0.03
RPL39P62891 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
RPL39P62891 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RPL39P62891 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RPL39P62891 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RPL39P62891 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RPL39P62891 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
RPL39P62891 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC14.88□□□□□ -0.03
RPL39P62891 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RPL39P62891 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC14.88□□□□□ -0.03
RPL39P62891 BX664725.1-201ENST00000438252 379 ntBASIC14.88□□□□□ -0.03
RPL39P62891 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC14.88□□□□□ -0.03
RPL39P62891 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RPL39P62891 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
RPL39P62891 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RPL39P62891 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RPL39P62891 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RPL39P62891 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RPL39P62891 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC14.88□□□□□ -0.03
RPL39P62891 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
RPL39P62891 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC14.88□□□□□ -0.03
RPL39P62891 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
RPL39P62891 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RPL39P62891 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RPL39P62891 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RPL39P62891 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RPL39P62891 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RPL39P62891 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
RPL39P62891 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
RPL39P62891 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC14.87□□□□□ -0.03
RPL39P62891 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
RPL39P62891 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
RPL39P62891 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
RPL39P62891 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RPL39P62891 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RPL39P62891 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC14.87□□□□□ -0.03
RPL39P62891 PARN-205ENST00000539279 1557 ntTSL 2 BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms